KEGG   Aquincola tertiaricarbonis: MW290_05830
Entry
MW290_05830       CDS       T08158                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ater  Aquincola tertiaricarbonis
Brite
KEGG Orthology (KO) [BR:ater00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ater03400]
    MW290_05830
Enzymes [BR:ater01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MW290_05830
    5.6.2.6  RNA 3'-5' helicase
     MW290_05830
DNA repair and recombination proteins [BR:ater03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MW290_05830
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: URI08099
LinkDB
Position
1:complement(1252348..1254930)
AA seq 860 aa
MTGRRRRYAPGAWFERHGWKPFPFQREVWSAMAAGRSGLLHATTGAGKTYAVWFGALARA
AALGVATDDARQAPPLGVLWLTPMRALAADTTRSLTLPLAEEAPAWTIGQRTGDTASAER
ARQDRRLPTALVTTPESLTLMLTRASAQQDLAGVHTVIVDEWHELLGNKRGVQVQLALAR
LRHWNPQLVVWGLSATLGNSAEAMATLVGDAQGQLVVGRVPKDLAIDTLLPADVGRFSWG
GHLGAQMQMPVVEEIERSGPTLVFTNVRSQAEAWYQLLLAARPDWAGLVALHHGSLDKSV
REWVELGLKEGRLRAVVATSSLDLGVDFLPVERVLQIGSAKGVARLLQRAGRSGHAPGRP
SRVTLVPTQALELVEGAAARRAAKAGQVEGRHTPAKPLDVLVQHLVTVALGGGFTPDALY
EEVRSAPAYATLTREEFDWALAFVEGGGSSLGAYPEYHRVLPDDQGVYRVPDAGIARRHR
MGVGTIVSDSTMPIQWVGGGVLGHLEESFIARLNPGDCFIFGGRALEYVRTRDMTAYVRK
ASSRSGKLASWNGAKMPLSSELADAIQALLHQAAREVAETYPDGLPEAEAPPPPARKGAA
FSEPELRAAWPMLQVQVRLSHLPQAGRLLVEQYRSREGHHLFVYPFGGRNVHLGLAQLLA
WRFSQQQPNTFSISINDYGFELLSIHPVEVAPLLDGRVLAEDGLMHDMLASLNSSALARK
RFREIARVAGLVFSGFPGAAKSTRQLQASSSLFYEVFRKYDAGNRLLSQAEHEVLAQELE
LGRLGEVLARMRAQQIDLVPLQVPTPMSLPLMVERFREQLSTEKLADRLARIVADAEKVL
AHPPLPPRPRLPKPRIVRRR
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgaccggacgccgccgccgttacgccccgggcgcctggttcgagcgccatggctggaag
ccgtttccgttccagcgcgaggtgtggtcggcgatggccgccggccgcagcggcctgctg
cacgccaccaccggcgccggcaagacctatgcggtgtggttcggcgcactggcgcgggcc
gccgcgctgggcgtggcgacggacgatgcccggcaggcgccgccgctgggcgtgctgtgg
ctgacgccgatgcgcgccctggccgccgacaccacccgctcgctcacgctgccgctggct
gaagaggcgccggcctggaccatcggccagcgcaccggcgacaccgcctcggccgagcgg
gcgcggcaggaccggcggctgcccaccgcgctggtcaccacgcccgaatcgctgacgctg
atgctcacccgcgccagcgcgcagcaggacctggccggcgtgcacaccgtcatcgtcgac
gagtggcatgagctgctgggcaacaagcggggcgtgcaggtgcagctggcgctggcgcgg
ctgcggcactggaacccgcagctggtggtgtggggcctgtcggccacgctgggcaactcg
gccgaggccatggccacgctggtgggcgatgcgcaaggccagctggtggtggggcgggtg
cccaaggacctggccatcgacacgctgctgcccgccgacgtgggccgcttctcgtggggc
ggccacctgggcgcgcagatgcagatgccggtggtcgaggagatcgagcgctcaggcccc
acgctggtgttcaccaacgtgcgttcgcaggcagaggcctggtaccagctgctgctggct
gcacggcccgactgggccggcctggtggcgctgcaccacggatcgttggacaagagcgtg
cgcgaatgggtggagctgggcctgaaggagggccggctgcgtgcggtggtggccacctcc
agcctggacctgggcgtggacttcctgccggtggagcgggtgctgcagatcggcagcgcc
aagggcgtggcccggctgctgcagcgcgccggccgcagcggccatgcgcccggccggccc
agccgcgtgaccctggtgcccacccaggcgctggagctggtggaaggcgccgcggcccgc
cgtgccgccaaggccggccaggtggaaggccgccacaccccggccaagccgctggacgtg
ctggtgcagcacctggtgacggtggcgctgggcggcggcttcacgcccgacgcgctgtat
gaggaagtgcgcagcgcacctgcctatgcaactttgacgcgtgaggagttcgactgggcg
ctggccttcgtcgagggtggcggcagcagcctgggcgcctaccccgaataccaccgcgtg
ctgcccgatgatcagggcgtctaccgcgtgcccgatgccggcatcgcccgccgccaccgc
atgggcgtgggcaccatcgtcagcgacagcaccatgccgatccagtgggtgggcggcggc
gtgctgggccacctggaagaaagcttcatcgcccgcctcaaccccggcgactgcttcatc
ttcggtggccgtgcgctggaatacgtgcgcacccgtgacatgacggcctacgtgcgcaag
gccagcagccgcagcggcaagctggcctcgtggaacggcgccaagatgccgctgtccagc
gagctggccgatgccatccaggccctgctgcaccaggctgcgcgcgaggtggccgagacc
taccccgacggcctgccggaggccgaagccccgccgccgccggcccgcaagggcgctgcg
ttcagcgagcctgaactgcgcgccgcctggccgatgctgcaggtgcaggtgcggctgtcg
cacctgccgcaggccggccggctgctggtggagcagtaccgttcgcgcgagggccatcac
ctcttcgtttacccgttcggcggccgcaacgtgcacctgggcctggcccagctgctggcc
tggcgcttctcgcagcagcagcccaacaccttctccatctcgatcaacgactacggcttc
gagctgctcagcatccacccggtggaggtggcgccgctgctggacggccgcgtgctggcg
gaagacggcctgatgcacgacatgctggccagcctgaacagcagcgcgctggcgcgcaag
cgcttccgcgagatcgcacgcgtggcggggctggtgttcagcggctttcccggcgcggcc
aagagcacgcggcagctgcaggcttcgtccagcctgttctacgaggtgttccgcaagtac
gacgccggcaaccgcctgctcagccaggccgagcacgaggtgctggcgcaagagctggaa
ctgggtcggctgggcgaggtgctggcgcgcatgcgggcccagcagatcgacctggtgccg
ctgcaggtgcccacgccgatgagcctgccgctgatggtcgagcgctttcgcgagcagctc
agcaccgagaagctggccgaccggctggcccgcatcgtggccgacgcggagaaggtgctg
gcccatccgccgctgcccccgcggccgcggctgcccaagccgcgcatcgtgcgccggcgc
tga

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