Aquincola tertiaricarbonis: MW290_13410
Help
Entry
MW290_13410 CDS
T08158
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ater
Aquincola tertiaricarbonis
Pathway
ater03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ater00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MW290_13410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ater03019
]
MW290_13410
Enzymes [BR:
ater01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MW290_13410
Messenger RNA biogenesis [BR:
ater03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MW290_13410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
URI06885
LinkDB
All DBs
Position
1:2926043..2927533
Genome browser
AA seq
496 aa
AA seq
DB search
MTFDQLGLAEPILRAVLEHGYTTPTPIQAQAIPIVLNGGDLLGGAQTGTGKTAGFTLPLL
HRLMAQPAVRDARGRVPVRGLILTPTRELAAQVEESVRTYGKYSKLTSMVMFGGVGMQPQ
VDKLRRGVDILVATPGRLLDHHQQGTLDLSKVEIFVLDEADRMLDMGFIHDIRKVLAVLP
QAKQSLLFSATFSDEIKALAERLLNKPSLVEVARRNATADTIAQKVHPVGRDRKKELLAH
LIKSEDWHQVLVFTRMKHGANRLTEYLNDQGISAMAIHGNKSQGARTKALADFKSGDLTC
LVATDIAARGIDIDQLPHVVNFELPNVPEDYVHRIGRTGRAGAQGEAVSLVCLDEELFLA
DIEKLIKRSIPRETVPGFEVPAGERAEPIVLGRMTIGVGAPRGGSRGGRPGGGGGGGGGG
RSGGRPPEARGGEPRRSSGAPSHGRPNAGGGGHAPRPAAAGGARPAGGQPPRRDDRRSSG
GGGGGGNGPRLTQPKR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgaccaactcggcctcgccgagccgatcctgcgtgccgtgctcgagcatggc
tacaccaccccgacgcccatccaggcccaggccattcccatcgtcttgaacggtggcgac
ctgctgggcggcgcccagaccggtaccggcaagaccgccggcttcaccctgccgctgctg
caccgcctgatggcccagcccgcggtgcgcgatgcccgcggccgcgtgccggtgcgtggc
ctcatcctcacgcccacgcgtgaactggccgcgcaggtggaagaaagcgtccgcacctac
ggcaagtacagcaagctcaccagcatggtgatgttcggcggcgtgggcatgcagccccag
gtcgacaagctgcgccgtggcgtcgacatcctggtggccacccccggccgcctgctcgac
caccatcagcaaggcacgctggacctgagcaaggtcgagatcttcgtgctcgacgaagcc
gaccgcatgctggacatgggcttcatccacgacatccgcaaggtgctggccgtgctgccc
caggccaagcagagcctgctgttctcggccaccttcagcgacgagatcaaggccctggcc
gagcgcctgctgaacaagccttcgctggtggaagtggcgcgccgcaacgccaccgccgac
accatcgcacagaaggtgcacccggtgggccgcgaccgcaagaaggagctgctggcgcac
ctgatcaagagcgaggactggcaccaggtgctggtgttcacgcgcatgaagcacggcgcc
aaccggctgaccgagtacctgaacgaccagggcatcagcgcgatggccatccacggcaac
aagagccagggtgcgcgcaccaaggcgctggccgacttcaagtcgggcgacctcacttgc
ctcgtggccaccgacatcgcggcccgcggcatcgacatcgaccagctgccccacgtcgtc
aacttcgagctgcccaacgtgcccgaggactacgtgcaccgcatcggccgcaccggccgt
gccggtgcacagggcgaagccgtgtcgctggtgtgcctggacgaagagctgttcctggcc
gacatcgagaagctgatcaagcgcagcatcccgcgagagacggtgccgggctttgaagtg
ccggccggcgagcgggccgagcccatcgtgctgggccgcatgaccatcggcgtcggtgcc
ccgcgcggcggcagccgtggcggccgcccgggtggcggtggcggcggtggtggtggtggc
cgctccggcggtcgtccgcccgaggcacgtggtggcgagccgcgccgctcgtcgggtgcg
ccttcgcacggtcgtcccaacgcaggcggcggcggccatgccccgcgcccggctgcggcc
ggtggtgcccgtccggcaggcggccagccgccgcgtcgcgacgatcgccgcagcagcggc
ggtggtggtggcggtggcaacggcccgcgactgacgcagcccaagcgctga
DBGET
integrated database retrieval system
