Aquincola tertiaricarbonis: MW290_20870
Help
Entry
MW290_20870 CDS
T08158
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ater
Aquincola tertiaricarbonis
Pathway
ater03030
DNA replication
ater03430
Mismatch repair
ater03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ater00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MW290_20870 (dnaE)
03430 Mismatch repair
MW290_20870 (dnaE)
03440 Homologous recombination
MW290_20870 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ater03032
]
MW290_20870 (dnaE)
03400 DNA repair and recombination proteins [BR:
ater03400
]
MW290_20870 (dnaE)
Enzymes [BR:
ater01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MW290_20870 (dnaE)
DNA replication proteins [BR:
ater03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MW290_20870 (dnaE)
DNA repair and recombination proteins [BR:
ater03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MW290_20870 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
URI11400
LinkDB
All DBs
Position
2:1427336..1430848
Genome browser
AA seq
1170 aa
AA seq
DB search
MPFVHLRIHTEFSVVDGTLRIDEAAQGAKRDGQVALGISDLSNLFGTVKFYSACRKAGVK
PLIGVDVWMEPEPGEKQPSRLLLIAQDAQGYLNINQLLSRAWTGNTQRAQAWVKWAWLQE
LSAGLIALSGADAGAVGQALLAGDDARADALAQRFSAAFPGRFYIELQRAGLPTNEPHVR
VAVPLAARLGLPVVATHPVQFNTAEDYEAHEARVCIAEGETLANPRRVKRFSREQYFKPQ
AEMEALFADIPSALANTLRIAQRCNLSLVLGKPRLPDFPTPGGIPIEQHFRAASLEGLEQ
RLLQLYPDAAKRDAERPRYVERLNFEIDVILKMGFPGYFLIVSDFITWAKNNGCPVGPGR
GSGAGSLVAYALSITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQGNRDRVIDYVKQKY
GLDAVSQIATFGTMAAKAALRDVGRVLGMGYGHVDSIAKLIPAPPGKTVTLAKVPENPDG
GVIYARKEAPELEQREAAEEEVAALLDLAARVEGMVRNIGMHAGGVLIAPGKITDFCPLY
QQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILETAKEFIMRRHPSQKDFAYEKIPL
DDARAYKLFSDGLTESVFQFESPGMQRMLRDARPSVFEDIIALVALYRPGPMDLIPSFCA
RKHGREEVVYPHKLLEGVLAETYGVMIYQEQVMQSAQVLGGYSLGGADLLRRAMGKKKPE
EMAKHREIFREGAAAKGIDGKTADEVFDLMEKFAGYGFNKSHAAAYALLAYHTAWLKVHY
TAEFFAANMCIETDDTDKLKVLLNDAQTHFGIRFEPPDVNSGTYRFEPIDDKTVRYGLGA
IKGTGQGAIEAIVAAREQGGPFRSLFDFCARVDRQRINKRVVEALIKAGAFDKLHADRAS
TLASVSLALDWADSQAAHADQGGLFDFDDAHGSSTQEPPLVAAEPWSVKERLTLEKTAIG
FYLSGHMFDQSEAEVRQFVRREVADLADSRDPQVVAGIVGDLRIINGNRGRVAIFKLDDK
SGFIEAVADEKTLDAHKELLRDDELLIIQGRVQPDRFSGGLRLNVQQVWDLPTARCRFGR
YLQVVLGNAGLEALPPLAAVVQEFPARRLVTEEGEQLQGLPVRLALQREQAVGVVDLGDA
GKFFPSDAALDRWLRSVPGGATVVYEAETT
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgtccaccttcgcatccataccgagttttccgtcgtcgacggcaccctgcgc
atcgacgaggcggcccagggcgccaagcgggacgggcaggtggccctgggcatcagcgac
ctgtccaacctgttcggcacggtcaagttctattcggcctgccgcaaggccggcgtcaag
ccgctgatcggcgtggacgtgtggatggagcccgagcccggcgaaaagcagcccagccgg
ctgctgctgatcgcgcaggatgcgcagggttacctgaacatcaaccagctgctgtcgcgt
gcctggacgggcaacacccagcgcgcccaggcctgggtcaagtgggcctggctgcaggag
ttgtcggcggggctgatcgcgctgtcgggcgccgatgccggcgcggtggggcaggcgctg
ctggccggcgacgatgcccgcgcggatgcgctggcccagcgcttctcggccgctttcccg
ggccgcttctacatcgagctgcaacgcgccggcctgcccaccaacgagccgcatgtgcgc
gtggcggtgccgctggcggcgcggctggggctgccggtggtggccacccacccggtgcag
ttcaacacggccgaggactacgaggcgcacgaggcccgcgtgtgcatcgccgaaggtgag
acgctggccaatccgcgccgcgtcaagcgcttttcgcgtgagcagtacttcaagccgcag
gccgagatggaggcgctgttcgccgacattcccagcgcgctggccaacacgctgcgcatc
gcgcagcgctgcaacctgagcctggtgctgggcaagccgcggctgcccgactttcccacg
ccgggcggcatcccgatcgagcagcacttccgcgccgcctcgctggaaggcctggaacag
cggctgctgcagctctaccccgatgcagccaagcgtgatgccgaacggccgcgctacgtg
gagcggctcaacttcgagatcgacgtcatcctgaagatgggctttccgggctatttcctg
atcgtgtcggacttcatcacctgggccaagaacaacggctgcccggtggggccgggccgg
ggctcgggcgccggctcgctggtggcctatgcgctgtcgatcaccgacctcgacccgctg
cgctacaacctgctgttcgagcgcttcctgaaccccgagcgggtgtcgatgcccgacttc
gacatcgacttctgccagggcaaccgcgaccgggtgatcgactacgtcaagcagaagtac
gggctggacgcggtgagccagatcgccaccttcggcaccatggcggccaaggccgcgctg
cgcgacgtgggccgcgtgctgggcatgggctatggccatgtcgactccatcgccaagctg
attccggcgccgcctggcaagacggtgacgctggccaaggtgccggagaaccccgacggc
ggcgtgatctacgcccgcaaggaagcgcctgagctggaacagcgcgaagccgccgaagag
gaagtcgccgcgctgctggacctggctgcgcgcgtggaaggcatggtgcgcaacatcggc
atgcacgccggtggcgtgctgatcgcgccgggcaagatcaccgacttctgcccgctgtac
cagcagccgggcagcgaatcggccgtcagccagtacgacaaggacgacgtcgaggccatc
ggcctggtgaagttcgacttcctgggcctggccacgctcaccatcctggagacggccaag
gaattcatcatgcgccggcatccttcgcagaaggacttcgcgtacgagaagattccgctg
gacgatgcgcgtgcctacaagctgttctccgacggcctgaccgagtcggtgttccagttc
gaatcacccggcatgcagcgcatgctgcgcgatgcccggcccagcgtgttcgaggacatc
atcgcgctggtggcgctgtaccggccgggcccgatggacctgattcccagcttctgcgcc
cgcaagcacgggcgtgaggaggtggtgtacccgcacaagctgctggaaggcgtgctcgcc
gagacctacggcgtgatgatctaccaggagcaggtgatgcagtcggcccaggtgctgggc
ggctactcgctcggcggcgccgacctgctgcgccgggccatgggcaagaagaagcccgag
gagatggccaagcaccgcgagatcttccgcgagggcgcggccgccaagggcatcgacggc
aagaccgccgacgaagtcttcgacctgatggagaagttcgcaggctacggcttcaacaag
agccatgccgccgcctacgccctgctggcctaccacacggcctggctgaaggtgcactac
acggccgagtttttcgcggccaacatgtgcatcgaaaccgacgacaccgacaagctcaag
gtgttgctcaacgatgcgcaaacgcacttcggcatccgcttcgagccgcctgacgtcaac
agcggcacctaccgcttcgaacccatcgacgacaagaccgtgcgctacggcctgggcgcc
atcaagggcaccggccagggcgcgatcgaggccatcgtcgccgcgcgcgagcagggcggt
ccgttccgcagcctgttcgacttctgcgcccgcgtggaccgccagcgcatcaacaagcgc
gtggtggaagcactgatcaaggccggtgccttcgacaagctgcacgccgaccgcgccagc
acgctggccagcgtgagcctggcgctggactgggccgacagccaggccgcgcatgccgac
cagggcggcctgttcgacttcgacgatgcccacggcagcagcacgcaggagccgccgctg
gtggccgccgagccgtggagcgtgaaggagcggctgacgctggaaaagaccgccatcggc
ttctacctctcgggccacatgttcgaccagagcgaagccgaggtgcgccagttcgtgcgc
cgcgaggtggccgacctggccgacagccgcgacccgcaggtggtggccggcatcgtcggc
gacctgcgcatcatcaacggcaaccgcggccgcgtggccatcttcaagctcgacgacaag
agcggcttcatcgaggccgtggccgacgagaagacgctggacgcccacaaggaactgctg
cgcgacgacgagctgctgatcatccagggccgggtgcagcccgaccgcttcagcggcggc
ctgcggctgaacgtgcagcaggtgtgggacctgcccaccgcgcgctgccgcttcggccgc
tacctgcaggtggtgctgggcaacgccgggctggaggcgttgccgccgctggccgcggtg
gtgcaggagtttccggcgcgccgcctggtgaccgaagaaggcgagcagctgcaaggcctg
ccggtgcgcctggcgctccagcgcgagcaggcggtgggcgtggtcgacctgggggacgcc
ggcaagttcttccccagcgatgcggcgctggaccgatggctgcgcagcgtgccgggcggt
gccaccgtggtgtacgaggccgaaaccacctga
DBGET
integrated database retrieval system
