Aquincola tertiaricarbonis: MW290_25155
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Entry
MW290_25155 CDS
T08158
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ater
Aquincola tertiaricarbonis
Brite
KEGG Orthology (KO) [BR:
ater00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ater03009
]
MW290_25155 (rlmD)
Enzymes [BR:
ater01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MW290_25155 (rlmD)
Ribosome biogenesis [BR:
ater03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MW290_25155 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
MTS
Methyltrans_SAM
Methyltransf_32
RrnaAD
Cons_hypoth95
UPF0020
Methyltransf_11
PCMT
PrmA
Motif
Other DBs
NCBI-ProteinID:
URI08865
LinkDB
All DBs
Position
2:complement(2344805..2346157)
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AA seq
450 aa
AA seq
DB search
MTQQNEWLTVESLDLEAQGVAHNEEGKVVFIEGALPGEQVQVQVGRRKNAWEQATMKVMR
RESSQRVTPGCPHFGLHAGACGGCKMQHLHVGAQVAVKQRTLEDNLWHLGKVKPERLLRP
IEGPAWHYRDRARLSVRHVIKKGEVLVGFHERKSRYIADMKVCPVLPKHVSDMLLPLREL
VMSMDQRERLPQIELAAGSDVTALVLRHLEPLTDADLERLRTFGRQYGVQWWLQPKGPDT
VHLLDEGGPQLSYQLAEFGITMPFKPTDFTQVNQHINAVLVGRALRLLGAQPDDRVIDWF
CGLGNFTLPIATQAREVLGIEGSEALVARSRENAKANGLAAKTSFVARNLFEMTPEQLMQ
DGRADKWLVDPPREGALALCKALADATQLPDTGAWTPPTRIVYVSCNPATLARDAGLLVH
QAGYRCLAAGAVNMFPHTAHVESIAVFERP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacagaatgaatggctgacggtcgaatcgctggacctggaagcccaaggcgtt
gcccataacgaagaaggcaaggtggtgttcatcgaaggcgccttgcccggtgagcaggtg
caggtgcaggtgggccgccgcaagaatgcgtgggagcaggccacgatgaaggtgatgcgc
cgcgagagctcgcagcgcgtgacgcccggctgtccgcacttcggcctgcatgcgggcgcc
tgcggcggctgcaagatgcagcacttgcacgtgggggcgcaggtggccgtcaagcagcgc
acgctggaagacaacctgtggcacctgggcaaggtcaagcccgagcggctgctgcgcccg
atcgaaggcccggcctggcactaccgcgaccgtgcgcgcctctcggtgcggcacgtcatc
aagaagggcgaggtgctggtcggcttccatgagcgcaagtcgcgttacatcgccgacatg
aaggtgtgcccggtgctgccgaagcacgtgagcgacatgctgctgccgctgcgcgagctg
gtgatgtccatggaccagcgcgagcgcctgccgcagatcgagctggccgcgggcagcgat
gtcacggccctggtgctgcgccacctcgagcccttgaccgatgccgacctggaacgcctg
cgcaccttcggccgccagtacggcgtgcaatggtggttgcagcccaagggccctgacacg
gtgcacctgctggacgaaggcggcccgcagctcagctaccagctggccgagttcggcatc
accatgcccttcaagccgaccgacttcacgcaggtcaaccagcacatcaacgcggtgctg
gtggggcgtgcgctgcgtctgctgggtgcgcagcccgatgaccgggtgatcgactggttc
tgcggcctgggcaacttcacgctgcccatcgccacccaggcgcgcgaggtgctgggcatc
gaaggcagcgaggccctggtggcccgctcgcgcgagaacgccaaggccaacggcctggcg
gccaagaccagcttcgtggcccgcaacctgttcgagatgacacccgagcagctgatgcag
gacggccgcgccgacaagtggctggtcgacccgccgcgcgaaggtgcgctggccttgtgc
aaggcgctggccgatgccacgcagctgcccgacaccggtgcatggacgccgcccacgcgc
atcgtctacgtcagctgcaacccggccacgctggcgcgtgatgcggggctgctggtgcac
caggcgggttatcgctgcctggcagcgggcgcggtgaacatgttcccgcacaccgcccac
gtcgaaagcatcgccgtcttcgagcgaccatga
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