Aquincola tertiaricarbonis: MW290_27745
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Entry
MW290_27745 CDS
T08158
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ater
Aquincola tertiaricarbonis
Brite
KEGG Orthology (KO) [BR:
ater00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ater03016
]
MW290_27745
Enzymes [BR:
ater01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MW290_27745
Transfer RNA biogenesis [BR:
ater03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MW290_27745
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
URI09362
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All DBs
Position
2:2904551..2906608
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AA seq
685 aa
AA seq
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MYALFDDSGKFLAGRVMSEAESSMQIELDSGKRVKVKLANVLMKFDKPGPAELIAAGQRL
ATEIDLDLAWEFAPEGEFGFADLARDYFDAKAGLEQQAAALFRLYEAPHYFRRMGKGVFK
KAPEETVKAALLGIERKKQQAAQIEAWATELAAGTCPAPVQEQLYKILFKPDKNAPEYKA
VVEAAKRSQRAPLDLLKAAGAIRSPYQFHWKRFLFEQFPKGTGFPALQAPAIAEPLPLAP
VQAFSIDDSQTTEIDDALSVQGLGTGTVVFGVHIAAPGLAITPGSAIDKVAGERLSTVYM
PGWKLTMLPDEVVQRYTLAEGQDCPAVSLYVTMDEATLEVRASETKLERVPIAANLRHDQ
LDDVVTEATLTGEAQAGYAFAPELAFAFRLARHLKAQREVVRGKPETFNRPDYNFRLEGH
TAEPQGDERVTISTRRRGAPLDLIVAEAMILANSTWGGWLAECGLPGIYRSQASLAPGIK
VRMGTKALPHAGMGVAQYTWATSPLRRYVDLVNQWQIIACARHGRTAALAAPFKPKDAQL
FSIISAFDAAYGAYNDFQHGIERYWTLRWLEQNGVTELDAAVMKDGLVRADTLPLVFRAS
GCEQLPRGAHVRVRITGMDLLTLDLHAQLVTRLDDAVAAVAGETEAEVDDEVQEAAPLSL
AIDLGDAGDAAEPGTAQEGAAPAAA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcactgttcgatgattccggcaagttcctggccggccgtgtgatgtccgaggcc
gagagctcgatgcagatcgagctcgactcgggcaagcgcgtcaaggtcaagctggccaat
gtcctgatgaagttcgacaagcccggcccggccgagctgatcgccgccggccagcgcctg
gcgaccgagatcgacctggacctggcctgggaattcgcccccgagggcgagttcggcttt
gccgacctggcgcgcgactacttcgacgccaaggccgggctggagcagcaggccgccgcc
ctcttccgcctctatgaggcgccgcactacttccggcgcatgggcaagggcgtgttcaaa
aaggcgcccgaagaaacggtgaaggcggcgctgctgggcatcgagcgcaagaagcagcag
gccgcgcagatcgaggcctgggccaccgagctggcggccggcacctgcccggcgccggtg
caggagcagctctacaagatcctgttcaagcccgacaagaacgcgcctgaatacaaggcc
gtggtcgaggccgccaagcgctcgcagcgcgcgccgctggacctgctgaaggcggccggt
gccatccgcagcccttaccagttccactggaagcgcttcctgttcgagcagttcccgaag
ggcacgggctttccggcgctgcaggccccggcgattgccgagccgctgccgctggcgcca
gtgcaggccttctcgatcgacgattcgcagaccaccgagatcgacgatgcactgtcggtg
cagggcctgggcaccggcaccgtggtgttcggcgtgcacatcgccgcaccgggcctggcc
atcacgccgggcagcgccatcgacaaggtggccggcgagcgcctgtccaccgtgtacatg
ccgggctggaaactgaccatgctgcccgacgaggtggtgcagcgctacacgctggccgaa
ggccaggactgcccggccgtgagcctgtacgtgaccatggacgaggccacgctggaagtg
cgcgccagcgaaaccaagctggagcgcgtgcccatcgccgccaacctgcgccacgaccag
ctggacgatgtggtgaccgaggccaccctgaccggtgaggcgcaggccggctatgccttc
gcgcccgagctggccttcgccttccgcctggcgcgccacctgaaggcgcagcgcgaggtg
gtgcgcggcaagcccgagaccttcaaccgccccgactacaacttccgcctggaaggccac
accgccgagccgcagggcgacgagcgcgtgaccatcagcacccgccgccgcggcgcgccg
ctggacctgatcgtggccgaagcgatgatcctggccaacagcacctggggcggctggctg
gccgaatgcggcctgcccggcatctaccgcagccaggccagcctggcgccgggcatcaaa
gtgcgcatgggcaccaaggcactgccgcatgccggcatgggcgtggcgcagtacacctgg
gccacctcgccgctgcgccggtacgttgacctggtgaaccagtggcagatcatcgcctgc
gcccgccacggccgcactgccgcgctggccgcgcccttcaagcccaaggacgcgcagctg
ttctccatcatctcggccttcgatgcggcctacggcgcctacaacgacttccagcacggc
atcgagcgctactggacgctgcgctggctggagcagaacggcgtgaccgaactggacgcc
gcggtgatgaaggacggcctggtgcgggccgacacgctgccgctggtgttccgcgcctcg
ggctgcgagcagctgccgcgcggcgcccatgtgcgcgtgcgcatcaccggcatggacctg
ctgacgctggacctgcatgcgcagctggtcacccgactggacgatgcggtggccgcagtc
gccggcgagaccgaggccgaggtggacgacgaggtgcaggaagccgcaccgctgtcgctg
gccatcgacctgggcgatgccggcgacgcggcggagcccggcaccgcgcaggagggtgcc
gcccccgcggcggcctga
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