Agrobacterium tumefaciens Ach5: Ach5_00050
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Entry
Ach5_00050 CDS
T03816
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03030
DNA replication
atf03430
Mismatch repair
atf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ach5_00050 (dnaQ)
03430 Mismatch repair
Ach5_00050 (dnaQ)
03440 Homologous recombination
Ach5_00050 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atf03032
]
Ach5_00050 (dnaQ)
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_00050 (dnaQ)
Enzymes [BR:
atf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ach5_00050 (dnaQ)
DNA replication proteins [BR:
atf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ach5_00050 (dnaQ)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ach5_00050 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AKC05787
LinkDB
All DBs
Position
circular:3109..3810
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AA seq
233 aa
AA seq
DB search
MREIIFDTETTGLESKLDRVIEIGGIELNNHFPTGRTLHIYINPEDRKVHPDALAVHGIT
DDFLKDKPKFAEVVDEIREFFEGARWVAHNATFDMGFINAEFARLGIAPVSSELVTDTLS
LARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQTALGFGSGS
KQQAVTIEDDDVPHEPLQRPHPLPSRLDAETIAAHGKLVLGMGDKAIWNRYQN
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcattttcgatacggaaaccacaggccttgaatcgaaactggaccgcgtg
atcgaaatcggcggaatcgagctcaacaaccattttccgaccggccgcacgttgcatatt
tatatcaacccggaagatcgcaaggttcacccggacgcgcttgcggtgcacggcatcacc
gacgacttcctgaaagacaagccgaaattcgccgaagtcgtcgacgaaatccgcgaattt
tttgaaggtgcccgctgggtggcgcataatgcgacattcgacatgggtttcatcaatgcg
gaatttgcccgcctcggcattgcgccggtctcatctgaattggtgacggatacgctttcg
cttgcacgccgcaagcacccgatgggtccgaattccctcgacgcactttgccggcgttac
gggatcgacaactcccaccgcaccaaacacggcgcgcttctcgactccgaactgctcgcc
gaagtctacatagaaatgattggtgggcgccagacagcgctcggtttcggttccggctcc
aaacagcaagcggtcactatcgaggatgatgatgtcccgcatgagccgttgcaaaggccg
catcctctaccatcaagactggatgcggagaccatcgcggcacacggcaagctcgttctc
ggcatgggcgacaaggcgatctggaaccgttaccagaattaa
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