Agrobacterium tumefaciens Ach5: Ach5_00180
Help
Entry
Ach5_00180 CDS
T03816
Symbol
trpB
Name
(GenBank) tryptophan synthase beta subunit
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00260
Glycine, serine and threonine metabolism
atf00400
Phenylalanine, tyrosine and tryptophan biosynthesis
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01230
Biosynthesis of amino acids
Module
atf_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ach5_00180 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Ach5_00180 (trpB)
Enzymes [BR:
atf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Ach5_00180 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
AKC05800
UniProt:
A0AA44FBA2
LinkDB
All DBs
Position
circular:15175..16395
Genome browser
AA seq
406 aa
AA seq
DB search
MNDAPTPNSFRAGPDEDGRFGIYGGRFVAETLMPLILDLQAEWDKAKTDPEFQAELKYLG
AHYTGRPSPLYFAERLTAELGGAKIYFKREELNHTGSHKINNCLGQILLAKRMGKTRIIA
ETGAGQHGVASATVAARFGLPCVVYMGATDVARQAPNVFRMKLLGAEVKPVTAGHGTLKD
AMNEALRDWVTNVDDTYYLIGTAAGPHPYPEMVRDFQAVIGEEAKAQMLEAEGRLPDMVI
AAVGGGSNAIGIFHPFLDDKSVRIVGVEAGGRGLSGEEHCASITAGSPGVLHGNRTYLLQ
DADGQIKEGHSISAGLDYPGIGPEHSWLNDIGRVEYVPIMDHEALDAFQMLTRLEGIIPA
LEPSHALAEVIKRAPKMGKDEIILMNLSGRGDKDVHTVSKFLGMEM
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgcgccaacacccaattctttccgcgccggtcccgatgaggacggccgtttt
ggcatttacggaggccgcttcgttgccgaaacgctgatgccgctcattctggatttgcag
gcggagtgggacaaggcaaagaccgatcccgaatttcaggcagaactcaaatatctcggc
gctcattacactggccgcccgagcccgctttatttcgcggaacgcctgacggccgaactg
ggcggcgccaagatctatttcaagcgcgaagagctgaatcacaccggctcgcacaagatc
aacaattgccttggccagatcctgcttgccaagcgcatgggcaagacccgtatcattgcc
gaaaccggtgccggccagcacggcgttgcctcggcgaccgtcgccgcacgcttcggcctg
ccctgcgtcgtttatatgggcgcgacggatgttgcccgtcaggcgccgaatgttttccgc
atgaagcttctgggcgctgaggtaaagccggtaacggctggccacggcactctgaaagac
gccatgaacgaggcgctgcgcgattgggttaccaatgtcgatgacacctattacctgatc
ggcacagctgccggcccgcatccctatccggaaatggttcgcgatttccaggccgtcatc
ggtgaggaagcaaaggcacagatgctggaggcggagggccgtcttccggatatggtcatt
gcggctgttggcggtggctcgaatgccatcggcatcttccatcctttccttgatgacaag
agtgtccgtatcgtcggcgtcgaggctggcggcaggggtctttcgggtgaggagcattgc
gcttcgatcacggccggttcgccgggggttctgcacggaaaccgcacctaccttcttcag
gatgcggatggccagatcaaggaaggccattccatctccgcaggtctcgattatcccggc
atcggccctgagcattcctggctgaacgatatcggccgcgtggaatatgtaccgatcatg
gaccacgaggcgctggacgccttccagatgctgacccgcctcgaaggcatcattcccgct
ctggagccaagccacgcgctggcagaagtcatcaagcgcgcaccgaagatgggcaaggat
gagatcatcctgatgaatctttcgggtcgtggggacaaggatgtccacaccgtcagcaag
ttcctcggaatggaaatgtaa
DBGET
integrated database retrieval system
