Agrobacterium tumefaciens Ach5: Ach5_00740
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Entry
Ach5_00740 CDS
T03816
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atf03016
]
Ach5_00740 (truB)
Enzymes [BR:
atf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Ach5_00740 (truB)
Transfer RNA biogenesis [BR:
atf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ach5_00740 (truB)
Prokaryotic type
Ach5_00740 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
AKC05856
LinkDB
All DBs
Position
circular:complement(87037..87984)
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AA seq
315 aa
AA seq
DB search
MSKPRKQQNRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGM
LPIALGDATKTVPYVMDGRKIYEFTVTWGEERATDDLEGEVVNSSDQRPDEQAIRDILPN
YTGVIMQTPPQFSAIKIAGERAYDLAREGETVEIPAREVEIHRLTLLACPDASTAHFEVE
CGKGTYVRALARDMGRDLGCFGHISQLRRTMVAPFGEDMMVPLETLTALEAIEDRDERLE
ALDAFLIDTAEALSSLPHLIINDDQAHRLKMGNPILLRGRDAPANHPEAYATAHGKLIAI
GEIGEGEFRPKRVFG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacagcagaaccgcaaacccaagggccgcccgatttcgggctgg
ctcattctcgacaagccgctcgatttcggctcaaccgaagccgtttccaagatcaaatgg
ctgttcaacgcccagaaggcaggtcacgccggaacgctcgaccccttggcgtccggcatg
ttgccgattgcactcggtgacgccacaaagaccgttccttacgtcatggacggccggaaa
atctacgagtttaccgtcacctggggtgaagaacgcgcaaccgacgatctggaaggcgag
gtagtcaactcctccgaccagcgcccggacgaacaggcgatccgcgatattctgcccaat
tataccggcgtgatcatgcagacgccgccgcagttttccgccatcaagattgccggtgag
cgggcctatgatctggcgcgtgaaggcgaaacggtggagattcccgcgcgcgaggtggaa
attcaccgcctgacgctgctcgcctgccccgacgccagcacagcgcatttcgaagtggaa
tgcggcaagggtacctatgtgcgggcgcttgcgcgcgacatgggccgggatctcggctgt
ttcggtcatatttcgcaattgcgccgtacaatggtcgcgccattcggcgaggacatgatg
gtaccgctcgaaaccttgacggcgctcgaagccatcgaagaccgcgacgagcggcttgaa
gcgctcgatgcttttctgatcgacacggcggaagcgctttcatcccttccccacctcatc
atcaatgatgatcaggcacaccggctgaagatgggcaacccgatcctgctgcgcgggcgt
gatgcgccggccaatcacccggaggcctatgccactgcgcatggcaagctcattgccatc
ggcgagatcggcgagggcgaattccggccgaagcgcgttttcggttga
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