Agrobacterium tumefaciens Ach5: Ach5_00980
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Entry
Ach5_00980 CDS
T03816
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03030
DNA replication
atf03410
Base excision repair
atf03420
Nucleotide excision repair
atf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ach5_00980 (polA)
03410 Base excision repair
Ach5_00980 (polA)
03420 Nucleotide excision repair
Ach5_00980 (polA)
03440 Homologous recombination
Ach5_00980 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atf03032
]
Ach5_00980 (polA)
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_00980 (polA)
Enzymes [BR:
atf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ach5_00980 (polA)
DNA replication proteins [BR:
atf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Ach5_00980 (polA)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Ach5_00980 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ach5_00980 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AKC05880
LinkDB
All DBs
Position
circular:113361..116348
Genome browser
AA seq
995 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDLYKANRTAPPEDLVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGVPDVVEKWGVAPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANA
ELARLSRQLVALRTDVPLEQSLEELVLEPQNGPKLIAFLKAMEFTTLTRRVAEATDSDAS
AIEAANVPVQWGADAHGPDLDAAPAVAAADDKTAVPASTTAPARKVTGEGSAPTDLATAR
QTVFSAAKIDTTAYTTIRDLAELDRWVAAARETGVVAFDTETTSLDPMQAELVGFSLAIA
DNGKDASGTDIRAAYVPLTHKTGSGGDLFSDGIRLAEGQVPFAEALTRLKDLLEDEAVLK
IAQNLKYDYLLMKRHGVVMQSFDDTMLISYVLEAGKTTHGMDTLSERWLGHTPIAYKDVA
GSGKSSITFDFVDIDKATAYAAEDADVTLRLWMVLKPRLAAERLTSVYERLERPLVPVLA
HMEERGITVDRQILSRLSGELAQKAAAFEEEVYQLAGERFNIGSPKQLGDILFGRMGLPG
GSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPGYVHPQTKRVHT
SYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRVLAHV
ADIPQLRSAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQL
SIARSEAGEYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSNPSMKA
FNERAAINAPIQGSAADIIRRAMVRIEPVLEAEKLSARMLLQVHDELIFEVEEGEIEKTL
PIVVSVMENAAMPAISMRVPLKVDARAADNWDEAH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgttgacggctccggtttcattttccgggcgttc
catgccattcccccgctgaaccgcaagtcggacgggctgccggtcaacgccgtttccggc
ttctgcaacatgttgtggaagctcctgaaggatgcgcgcaatactgatgtcggcgtcacg
cccacgcattttgccgtgattttcgactattcgtcgaaaaccttccgcaacgagctgtac
gatctatacaaggccaaccgcaccgcaccgccggaagatctggtgccgcagtttggcctg
atccgcgaggcgacacgggccttcaaccttccctgcattgagacggaaggcttcgaggcg
gatgacatcatcgccacttacgcccgtcaggcggaggcgattggcgccgatgtcaccatc
atttcttccgacaaggatctgatgcagctcgtcacggccaatgtgcatatgtacgacgcc
atgaaggacaagcagatcggcgttcccgatgtcgtcgaaaaatggggtgtagccccggaa
aagatgatcgaccttcaggcgatgaccggcgattccaccgataatgttccgggtattcct
ggtatcgggccgaaaacggccgcgcaattgctggaagaatacggcgatctcgacacgctg
ctggcgcgggcaggagaaatcaagcagcagaaacgccgcgaaaacatcatcgccaatgcg
gagcttgcccgcctttccagacagctcgtggcgctcagaaccgatgtgccgctggagcag
tctctggaagaactggtgctcgaaccgcagaacgggccgaaactcatcgctttcctgaag
gcgatggagttcacgacgctgacgcgccgggtagctgaagccaccgatagcgatgcctct
gccatcgaagccgccaatgtgccggtgcaatggggcgctgatgcccatggaccagacctc
gacgccgcgcctgcagttgccgcagctgatgacaagaccgctgtgccggcgtcaaccacc
gctccggcacggaaggtgacaggggagggcagtgcgcccaccgatctcgccacggcacgg
cagacggttttctccgccgccaagatcgacacgaccgcctatacgacgatcagggatctg
gcggagctggatcgttgggttgccgctgcccgcgaaacaggtgtcgtcgccttcgacacg
gaaacgacctcgctcgaccccatgcaggcggaactcgtcggtttctcgctggcgattgcc
gataacggcaaggatgcctcaggcaccgatatccgcgctgcctatgtgccattgacgcac
aagaccggctccggtggcgatcttttcagcgatggaatcaggcttgctgaaggacaggtg
ccgtttgccgaggcgctgacacgtttgaaggatcttcttgaagacgaagccgttctgaaa
atcgcgcagaacctcaaatatgactacctgctgatgaagcgccacggcgtcgtcatgcag
agtttcgacgataccatgctgatttcctacgttcttgaggcgggaaaaaccacgcatggc
atggatacgctttccgaacgctggctcggccacacgccgatcgcctacaaggacgtggcg
ggatcgggcaagtcgagcatcaccttcgatttcgtcgatattgacaaggcgaccgcttac
gccgccgaagacgcggatgtcactctgcggctttggatggtgctgaagccccggcttgcc
gcagagcggctgaccagtgtgtatgagcggctggagcgccctctggtgcctgtactggcg
catatggaggagcgtggcatcaccgtggaccgacagatcctgtcgcgtctctccggtgaa
ctcgcccagaaggcggctgctttcgaagaggaagtctaccaactggcaggcgagcgtttc
aacatcggatcgccgaagcagctcggcgatatcctgttcggccggatgggtctgcctggc
ggctccaagaccaagacgggccaatggtccacatcggcgcaggttctcgaagatctggcg
gcggaaggtgccgaattaccgcgaaagatcgtcgactggcggcagctgaccaagctgaaa
tcgacctatacggatgcgcttcccggctatgtccatccgcagacgaaacgggtgcacact
tcctacgcgctggcctccaccaccacggggcgcctgtcgtcctcggagccgaaccttcag
aacattccggtgcgcacggcggaaggccgcaagatccgcacggccttcatctccaccccc
ggacacaagcttctttccgccgattacagccagatcgagctacgtgtgcttgcccatgtc
gccgatattccgcagcttcgcagcgcattcgaaaacggcatcgacattcatgcgatgacc
gcatcggaaatgttcggggtgccggtggaaggcatgccgtctgaagtgcgccgacgtgcc
aaggccatcaacttcggcatcatctacggtatttccgctttcggccttgccaaccagctc
agcatcgcgcgctccgaagcgggcgaatatatcaagaaatatttcgagcgttttcctggc
attcgcgattacatggaagcgaccaaggctttcgcccgcgagaacggctatgtcgagacg
attttcggccgccgcgcgcattatccggaaatccgctcctccaacccttccatgaaggcc
ttcaacgagcgtgcggccatcaacgcacctatccaggggtctgcagccgatatcattcgt
cgtgcgatggtccgtatcgagccggtgctggaggcggaaaagctttctgcccgcatgctg
ctgcaggtacatgacgaactcatcttcgaagtcgaggaaggggaaatcgaaaagaccctg
cccatcgtcgtctcggtgatggaaaatgcagccatgccggctatttccatgagggttccg
ctcaaggtggatgcccgcgcggccgacaactgggacgaggcgcattga
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