Agrobacterium tumefaciens Ach5: Ach5_02030
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Entry
Ach5_02030 CDS
T03816
Symbol
ctpD
Name
(GenBank) component of type IV pilus, CtpD
KO
K02280
pilus assembly protein CpaC
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ach5_02030 (ctpD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
atf02044
]
Ach5_02030 (ctpD)
02035 Bacterial motility proteins [BR:
atf02035
]
Ach5_02030 (ctpD)
Secretion system [BR:
atf02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Ach5_02030 (ctpD)
Bacterial motility proteins [BR:
atf02035
]
Pilus system
Pilus assembly proteins
Ach5_02030 (ctpD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
AKC05985
LinkDB
All DBs
Position
circular:complement(224343..225926)
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AA seq
527 aa
AA seq
DB search
MTGGSMAKRIKQHLHSSMAGSLAFCLAFSGIPGQHSPAFLRISEAEAQSASIVRITESGS
GIRKRLKLGLNKALVIDLPEDAHDILVADPSLADAVTRTSKRIYLFGKTVGQTNIFIFGD
GGREIVSLDLEVERDISGLEANIRRFIPESDIKVEIVSDNIVLTGSVRTPQDSARAVQLA
EAFLKGGEATTRNISLTGGDNGGDAAIFAENRQTSQIVNMLTIEGEDQVTLKVTVAEVSR
QVLKQLGFNGSISSSTSNNGFEFSNPSNLGNAISGASRIASGAIGSGSLNFASYLNAMEQ
AGVVRTLAEPSLTAISGEQAKFYVGGDFRLPAEQEVTIDKETGQPTITRTTNTVDYGITL
NFRPVVLSPGRISLKIETNVSEPTYEGNVVTGNAGRTIPGSTYMSIRKRETSTTVELPSG
GSIVIAGLVQDNIRQAMSGLPGISKVPIFGTLFRSKDFIRNETELVIIATPYLVRPVARN
QIARPDDNFNPENDAAMYFMNRVNKVYGRKDQVQAAPYQGSVGFIYK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggggttccatggcaaagcgcattaaacaacacctgcattcctcaatggcgggc
agccttgcattttgcttggctttttcaggtattccgggtcagcactcacccgcgtttttg
cgtatcagcgaagccgaggctcaaagcgcgagcatcgtgcggatcaccgaaagcggtagt
ggcattcgcaagcgcctgaagctcggtctcaacaaggcactggtcatcgatctgccggag
gatgcccatgatattctcgtcgccgatccgagccttgcagatgccgtaacgcgcacgtcc
aagcgcatctacctgttcggaaaaacggtgggccagaccaatatcttcattttcggagat
ggcgggcgcgaaatcgtcagtcttgatcttgaggtcgagcgcgatatctccgggcttgaa
gccaatatccgccgtttcattcccgaatcggacatcaaggtagagatcgtttcggacaac
atcgttctcactgggtcagtgcgcacacctcaggattcggcacgcgctgtccagcttgcc
gaagcatttctgaaaggcggcgaagccaccacccgcaacatatcgctgacgggcggtgac
aatggcggtgacgcggctatatttgccgaaaaccgccagacatcgcagatcgtcaatatg
ctgacgattgagggcgaagatcaggtgacgctgaaagtcaccgttgctgaagttagccgg
caggtgctgaaacagcttggcttcaatggttccatcagcagctcgacaagcaataacggt
ttcgaattttcaaatccgtccaatctcggaaatgcaattagcggtgcgtcgcgaatagcc
agtggcgcgattggctccggctcgctcaactttgcttcctatctcaacgccatggaacag
gcgggtgtcgtgcgcactctggccgaaccaagtcttaccgccatctccggcgaacaggcc
aagttctacgtggggggcgatttccgtctgcctgcagagcaggaagttaccatcgacaag
gaaacgggccagccaaccataacgcgtaccaccaacacggtcgactacggcatcacgttg
aacttcaggcccgtcgtgctttcaccgggacggatcagccttaaaatcgagaccaatgtt
tccgagccgacatatgaaggcaacgttgtaaccggaaatgcgggccgcacgatcccaggc
tccacctacatgtcgatccgcaaacgtgaaacctcgacaacagtcgaacttccatccggc
ggctcgattgtgatcgcaggtctggtccaggacaatattcgccaggccatgtctggactt
cccggcatttccaaagtcccgatcttcggcacgcttttccgcagcaaggatttcatccgc
aacgagacggagcttgtcatcatagcaacgccctatctggtacgtccggttgcgcgcaac
cagatcgcccggccggatgacaacttcaacccggaaaacgatgcggccatgtatttcatg
aaccgtgtcaacaaggtctatggccgcaaggaccaggttcaggcggctccctatcaggga
tcagtggggttcatctacaaatga
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