Agrobacterium tumefaciens Ach5: Ach5_02480
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Entry
Ach5_02480 CDS
T03816
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Ach5_02480 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_02480 (xseA)
Enzymes [BR:
atf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Ach5_02480 (xseA)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Ach5_02480 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AKC06030
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All DBs
Position
circular:262995..264599
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AA seq
534 aa
AA seq
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MSDIFSNAALSNLAEFSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFSLKD
DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIESLEPAGAGALMAL
LEDRRRRLAAEGLFDAERKRRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV
KVQGEGSGEEVVNAIRGFNALQPGGEIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAES
EIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVSRQ
MDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLEMTTLNKRRAFERSASGLRP
EILLNGLRQHRQRVTERMQRAEALVERRLLQAQSRISSTDSALRSLPARLLGQLERQKER
VVTATRRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDEENRPLTRAAAI
ASGAMVSMEFADGRVAALTTGEATPSSDVPTPAAPKKKPVKPASSDPGNQGSLF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattttctccaatgccgcattgagcaatcttgccgagttctcggtttccgaa
ctgtcgggttccatcaagcgaacggtggagacggctttcgatcaggtgagggtgcgcggc
gagatttccggctaccggggtccgcattcttcgggtcacgcctatttctccctaaaggac
gatcgcgcccgcatcgatgcggttatctggaagggtactttctcgcggctgaagttccgc
ccggaagagggcatggaggtcatcgccaccggcaaggtcaccacctttcccggctcctcg
aaatatcagatcgtcatagaaagcctggagccggccggcgcgggcgcgctgatggctttg
ctggaggaccgccgccggcgtctggcggcggaagggctgttcgatgcggaacgcaaacgc
cgcctgccgttcatgccgcgtgtcatcggcgttgtcacatcgcccacgggcgcagtcatt
cgcgatatcctccaccgcatttcggatcgttttccggtccatgtcgtcgtctggccggtc
aaggtgcagggggaaggttcgggtgaggaagtggtgaacgccattcgcggtttcaatgcg
cttcagcccggcggtgagattgcacgccccgacgtgctgatcgtcgcccgtggtggcggc
agtctggaagatctctggagcttcaacgacgaaatcgtcgtgcgcgccgctgcagagagc
gaaatcccgctgatttccgctgtggggcatgagacggatacgaccctgatcgactacgcc
gccgacgtgcgcgcaccgacaccgacgggtgccgccgaaatggccgtgccggtgcgtgcg
gaactggaggcgcagctctccggccttgcggcgcgcctttccggctcggtatcacgccaa
atggacaatcgccgacagggcgtgcgtgctctggtgcgtgcgctgccatcgcttgaccag
cttctggctctgccgcgccgtcgtttcgacgaggccgcaagcggtttgggtcgcgggctt
gaaatgacgacgctgaacaagcgccgcgcgttcgaacgctctgcttcgggtctgaggccg
gaaatcctgctgaatggtctgcggcagcatcgccagcgtgttacggaacgcatgcagagg
gccgaggcgcttgtggagcgccgcctgttgcaggcacagtcgagaatttcctcgaccgat
tccgcgctgcgttcgctgccagcccgcttgctcggccagttggagaggcagaaggaacgg
gtcgtcaccgcaacgcgacgtgccgataccgccgtgcttcaccgcatggcgcagaaccgc
tcgggccttgctgcccatgaccgcatcctgcagtcgctgtcctataagaatgtgttgaac
cgcggttatgctgtcatccgcgacgaggagaaccggcccctgacccgggctgctgccatc
gcgtccggcgctatggtgtctatggagttcgccgacggtcgcgtggccgccctgacgaca
ggcgaggctactccatcatctgacgttcccacgcctgccgctcccaaaaagaagccggtg
aaaccggcctcttcggacccgggaaatcagggcagtctgttctga
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