Agrobacterium tumefaciens Ach5: Ach5_03080 Help Entry Ach5_03080        CDS       T03816                                  Symbol rpoN Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism atf  Agrobacterium tumefaciens Ach5 Pathway atf02020   Two-component system atf02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:atf00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     Ach5_03080 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     Ach5_03080 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:atf03021]     Ach5_03080 (rpoN) Transcription machinery [BR:atf03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      Ach5_03080 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Motif Other DBs NCBI-ProteinID:  AKC06090 UniProt:  A0AA86KP07 LinkDB All DBs Position circular:complement(321460..323010) Genome browser AA seq 516 aa AA seqDB search MALSASLLLRQNQSLVMTPQLMQSIQLLQMTHFELTQFIAQEVERNPLLEIAANDGDLSS DSPVDAENFGDADSEGSDKSAPVTADSDDWYGDRAANLGEQLDTSFENVFPDDTEPRKPD APELAGQWKSMPGQESGESYDLDDFVAAKQTLADHLNQQLPLAISSVEDRMIADALIGQL DETGYIAVDAVEDVAERLGAAPSAVERILETLQGFDPPGVFSRSLSECLAIQLAQKDRLD PAMRAFIDNLELLAKRDFASLKKLCGVDEEDLLDMLAEIRTLNPRPGAGYDSTVSETIVP DIIIRPSSAGGWLVEINPETLPRVLINQTYFAEVSRHKSREGEDQDFLSECMQTAHWLTR SLDQRARTIMKVATEIVRQQDAFLVNGVDHLRPLNLKTVADAIKMHESTVSRVTSKKYML TPRGLFELKYFFSVSISSVEGGDSHSAEAVRHRIKAMIAQEAADAVLSDDDIVDNLKKSG IDLARRTVAKYREAMNIPSSVQRRREKKALARLSAF NT seq 1551 nt NT seq  +upstreamnt  +downstreamnt atggcattatctgccagccttttgctgcgtcaaaaccagtctctcgtgatgacaccgcaa ctgatgcagtccatccagctgcttcagatgacgcatttcgaactgacgcagttcatcgcg caggaggtggagcgcaatcctttgcttgaaattgcggcaaacgacggcgatttgagcagc gatagccctgttgatgcggagaatttcggcgatgccgacagcgaagggtccgacaagtcc gcgccggtaacggccgacagcgacgactggtacggcgatcgcgcggcaaatctcggcgaa cagctcgacaccagcttcgaaaatgtctttcctgacgataccgaacccagaaagcccgac gcacccgaactggcggggcagtggaaatccatgcccgggcaggagtcaggcgagagttac gatctcgacgacttcgttgccgcgaaacagaccctcgccgaccatctcaatcagcaattg cctctcgccatatcctctgtggaagacaggatgatcgccgatgcgctgatcggccagctc gacgagaccggatatatcgccgtagatgccgtcgaagacgtcgctgaacggctgggggcg gcgccttcggcagtggagcgcattctggagacgcttcagggctttgatcctcccggcgtg ttttcccgctcgctgagcgaatgtctggcgatccagcttgcccagaaggacaggcttgat ccggcaatgcgggcttttatcgacaatctggagcttctggcgaaacgggatttcgcttct ctaaaaaaactctgcggcgtggatgaggaagaccttctcgacatgctggcggaaatccgc acgctcaatccgcgtccgggcgctggttacgattcgaccgtttccgagacaatcgttcct gatatcatcattcgcccctcctctgccggcggctggcttgtggaaatcaaccccgagacc ctgccgcgcgtgctcatcaaccagacctatttcgcagaggtttcaaggcacaagtcgcgt gagggagaggatcaggatttcctttccgaatgcatgcagacggcccattggctgacccgc agcctcgaccagcgcgctagaacgatcatgaaggtggcgaccgaaatcgtgcgccagcag gacgcctttctcgtcaatggcgtggaccacctgcgcccgctgaacctcaagacggtggcc gacgccatcaagatgcacgaatccaccgtcagccgggtgacgtcgaaaaaatacatgctg acgccgcgcggcctgttcgagctgaagtatttcttcagtgtttccatcagctcggtggaa ggcggtgacagccattctgcagaagcggtgcgtcaccgcatcaaggcgatgatcgcgcag gaggccgccgacgcagtgctttccgatgacgatatcgtcgataatctgaaaaagagtggt atcgatcttgcccgccgcaccgtggccaaatatcgcgaggcgatgaacatcccatcctcc gttcagagacggcgcgagaagaaggccctggccagactgtcggcgttctga

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