Agrobacterium tumefaciens Ach5: Ach5_03450
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Entry
Ach5_03450 CDS
T03816
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00300
Lysine biosynthesis
atf01100
Metabolic pathways
atf01120
Microbial metabolism in diverse environments
atf01230
Biosynthesis of amino acids
Module
atf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ach5_03450 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atf01002
]
Ach5_03450 (dapE)
Enzymes [BR:
atf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Ach5_03450 (dapE)
Peptidases and inhibitors [BR:
atf01002
]
Metallo peptidases
Family M20
Ach5_03450 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AKC06127
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All DBs
Position
circular:complement(359930..361126)
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AA seq
398 aa
AA seq
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MTTTDPVANLAALIRCPSVTPAEGGALSLLDTLLSPLGFAVEKMVAREAGTPDVENLYAR
LGTEGPHLMFAGHTDVVPVGDEAAWSHPPFAAEIAGGEMFGRGAVDMKGGIACFVAAIAR
YIEKHGKPKGSVSFLITGDEEGPSINGTSKLLEWAAAKGEAWDACVVGEPTNPDQLGDMI
KIGRRGSISGRITVHGVQGHAAYPHLADNPIRGLLQLTHALMHPPFDHGTDDFQPSNLEV
TTIDTGNAATNVIPARATASFNIRFNDSWTVESLRAEIIRRLDAAAAEGELRPDRSPVKY
EIVWADRPAHVFLTRNNALISSLSGAVEAVTGKEPKLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVEVADLETLTRIYETFIERWFSHADGK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgatcccgttgccaatctcgccgccctcatccgttgcccttcggtgacg
cccgccgaaggtggcgcgctatcgctgctagacaccctgctttcaccgcttggctttgcg
gtggaaaagatggtggcgagggaagcgggaacgcctgacgttgaaaacctctacgcccgg
cttggcacggaaggtccgcacctgatgtttgcgggccataccgatgtcgttccggtgggc
gacgaggcggcatggagccatccgccctttgccgctgaaattgccggcggcgaaatgttc
ggccgtggtgcggtggacatgaagggcggcattgcctgtttcgttgccgccattgcccgc
tacatcgagaaacacggaaaaccgaaaggttccgtttctttcctgatcaccggtgacgag
gaaggcccctcgatcaacggcacctccaagctgctggaatgggccgccgccaaaggcgag
gcatgggatgcctgcgtggtgggtgaaccgaccaaccccgaccagctgggcgacatgatc
aagatcggccgccggggatcgatttcgggccgcatcaccgtgcatggcgtgcagggtcat
gccgcatatccgcatctggccgacaaccccattcgcgggctgctgcaactgacccacgcg
ctgatgcatccgcccttcgatcacggcacggacgacttccagccgtccaatctggaagtg
acgaccatcgacaccggcaatgccgccacaaatgtcattccggcgcgggcgacggcgtcg
ttcaacatccgtttcaatgacagctggacggtggagagcctgcgggcggaaatcatccgc
cgcctcgatgccgccgctgccgagggagaacttcgtcccgaccgcagcccggtcaaatat
gagatcgtctgggccgaccgtccggcccatgttttcctgacccggaacaatgcgctcatc
tcatcgctttccggcgccgtggaagccgtgacaggcaaggagcccaagctttcgaccacc
ggcggcacgtcggatgcgcgtttcatcaaggattattgccccgtcgtggaattcggcctc
gtcgggcagaccatgcatatggtcgatgagcgcgtggaagtcgccgatctggagacgctg
acacgcatctacgagaccttcatcgaacgctggttctcccatgccgacggcaagtga
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