Agrobacterium tumefaciens Ach5: Ach5_05850
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Entry
Ach5_05850 CDS
T03816
Symbol
glcD
Name
(GenBank) glycolate oxidase subunit
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00630
Glyoxylate and dicarboxylate metabolism
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ach5_05850 (glcD)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
Ach5_05850 (glcD)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AKC06364
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All DBs
Position
circular:622418..623851
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AA seq
477 aa
AA seq
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MTQPIKFLEPRAAVLSSRDRIISDLKDILAEDCLVHEPRELVPFETDAFVSYRHLPLAVA
LPKTTEEVAAVLKYCHRYGIPVVPRGAGTSLSGGAIPQEDAVVIGLSKMSAILELDFYNR
TARVQAGVTNLSISDAAGAEGFFYAPDPSSQLACTIGGNVGMNSGGAHCLKYGVTTNNLL
GVKMVLVDGTVMELGGQHLDAAGYDLLALVCGSEGQLGIVTEATVRLIAKPEGARPVLFG
FETSEEAGSCVADIIGAGIIPVAIEFMDKPAIEICEAFAKAGYPLDVGALLIVEVEGSEA
EMDAMLADIVAIAKKHSVKTVRECQSAMEAAAIWKGRKSAFGATGRIADYICMDGTVPLS
QLSYVLKKTSEITDRLGLRVANVFHAGDGNMHPLILFNANDPQDAARAEEAGNEILKLCV
DAGGCLTGEHGVGIEKRDLMRHQYAEADLAQQMAVRAAFDEGWLMNPSKVFPLEGRG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagccaatcaagtttctggagccgcgtgcggcggttttatcgagccgtgaccgc
atcatatccgatctgaaggatatcctggccgaggactgtctcgtgcacgagccgcgtgag
ctcgtgcctttcgagaccgacgctttcgtctcctaccgccacctgccgctggccgtcgcc
ttgccgaagaccaccgaagaggtcgcagcggtgctgaaatattgtcaccgttacggcatt
cctgtcgtgccgcgcggcgcgggcacctcgctttccggcggcgccattccgcaggaagat
gcggtggtgatcggcctttcgaagatgtccgcgatcctcgaactcgatttttacaatcgc
acggcaagggtacaggcgggcgtcaccaatctctccatttccgatgcggccggtgcggaa
ggcttcttttatgcgccggacccaagctcccagcttgcctgcaccatcggcggcaatgtc
ggcatgaattccggcggtgcgcactgcctgaaatacggtgtcaccaccaataatctgctc
ggcgtaaaaatggtgcttgtcgatggcacggtgatggagctgggcggccagcatcttgac
gccgccggttacgatcttctcgccctcgtttgtggttcggaaggccagctcggcatcgtc
accgaggcgacggtgcggctgattgccaagccggagggcgcgcgcccggtgctgtttggt
ttcgaaacctccgaagaagctggctcctgcgtggccgatatcatcggcgcgggcatcatt
cctgtcgccatcgaattcatggacaagccggcaatcgagatttgcgaggccttcgccaag
gccggatatccgctggatgtcggcgcgctgctgatcgtcgaggtcgaaggctcggaggcg
gaaatggacgccatgctggccgatattgtcgccattgcgaaaaaacacagcgtgaagacg
gtcagggaatgccagtcggccatggaggccgcggcgatctggaagggccggaaatccgct
ttcggcgcaacgggccgcatcgcggactatatctgcatggatggcacggtgccgctttcc
cagctttcctatgtgctgaaaaaaacaagcgaaatcaccgaccgcctcggccttcgcgtc
gcgaatgtctttcatgcgggcgatggcaacatgcatccgctgatcctgttcaacgccaac
gatccgcaagacgccgcccgggccgaagaggcgggcaatgaaatcctgaagctctgcgtc
gatgcgggcggttgcctcaccggcgaacacggtgtcggcatcgaaaaacgcgacctgatg
cggcaccaatatgccgaggctgatcttgcccagcagatggcggttcgcgctgcttttgac
gagggctggttgatgaacccttccaaggtgttcccgctggaggggaggggatga
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