Agrobacterium tumefaciens Ach5: Ach5_05880
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Entry
Ach5_05880 CDS
T03816
Symbol
glcF
Name
(GenBank) glycolate oxidase iron-sulfur subunit
KO
K11473
glycolate dehydrogenase iron-sulfur subunit [EC:
1.1.99.14
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00630
Glyoxylate and dicarboxylate metabolism
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ach5_05880 (glcF)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
Ach5_05880 (glcF)
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Gene cluster
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Motif
Pfam:
CCG
Fer4_8
Fer4_7
Fer4_17
Fer4_10
Fer4_16
Fer4_6
Fer4_9
Fer4_2
Fer4
Fer4_4
Fer4_21
Fer4_18
DUF6906
LdpA_Fe-S-bd
Motif
Other DBs
NCBI-ProteinID:
AKC06367
UniProt:
A0A3G2DFX3
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Position
circular:625149..626450
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AA seq
433 aa
AA seq
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MQTSFTPEQLADPHVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLE
NSRPADREVVTHIDRCLSCLACTTTCPSGVDYMHLVDHARAHIEQTYKRPFMDRLTRNLL
AAVLPYPGRFRLALHLARITRPFAGVLAKFPALKPLQSMLALAPASVPAVSASARPGERS
AEGEKRGRVAILTGCAQPVLDPGINEATLRLLARLGVEVVVPKGEGCCGSLVHHMGREAE
ALAAARRNVDVWMREMENGGLDAVIITASGCGTTIKDYGHMLRLDPAYADKAARVSALAK
DITEYLATLDLPQKESQGLTVAYHSACSMQHGQKITMAPKQLLKAAGFTVRDPAEGHLCC
GSAGTYNIMQPEISGKLKARKVRNIEATRADVIATGNIGCITQIATGTEMPILHTVELLD
WAYGGPKPARLLA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacatccttcacgcccgagcaactggctgatccgcatgtggcggaatccgaaaaa
atccttcgcaaatgtgtgcattgcggcttctgcaccgccacctgtcccacctatgtcacg
cttggcaatgagctggacagtccgcgcggccgcatctacctcatcaaggacatgctggaa
aatagccgcccggcggaccgcgaagtcgtcacccatatcgaccgctgcctgtcctgcctt
gcctgcaccaccacctgtccgtccggcgtcgactacatgcatctggtcgatcacgcccgc
gcccatatcgaacaaacctataaacgtcccttcatggaccgcctgacccgcaatcttctg
gctgcggttctgccttatcccggtcgcttccggctggccttgcatctggcacggatcacg
cgacccttcgccggtgtgctcgcgaagtttcccgcgctgaaaccgctgcaatccatgctc
gctctcgccccggcttccgtgcccgccgtttcagcttctgcccgtccgggtgaacggtca
gccgaaggtgaaaagcgtggacgtgtcgccattcttaccggctgcgcccagccggtgctt
gaccctggtatcaacgaggcgacgctgcgtcttctggcgcggcttggcgtggaggttgtc
gtgccgaagggggaaggctgctgcggatcgttggtgcaccatatggggcgcgaggccgag
gcgctcgccgccgcccgccgcaatgtcgatgtatggatgcgtgaaatggaaaatggcggc
ctcgatgccgtcatcatcaccgcatccggctgcggcacgaccatcaaggactacggccat
atgctacggcttgatccggcctatgcggacaaagccgcacgggtatcggcactcgcgaag
gacatcaccgaatatcttgccacgctcgacctgccgcaaaaggaaagccagggcctaacg
gttgcctatcattcggcctgctccatgcagcatggccagaagatcaccatggcaccgaag
caattgctgaaagcggctggttttaccgtccgcgatccggcggaagggcacctctgctgc
gggtcggccggaacctacaacatcatgcagccggagatctcaggaaagctgaaggcgcgc
aaggtgaggaacatcgaggccacacgcgcggatgtcattgccaccggcaatatcggctgc
atcacgcagatcgcgactggcacggaaatgccgatcctgcacacggtcgagctgctggac
tgggcttatggcggaccgaaacccgcgaggcttttggcttag
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