Agrobacterium tumefaciens Ach5: Ach5_06300
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Entry
Ach5_06300 CDS
T03816
Symbol
kdgR
Name
(GenBank) transcriptional regulator, IclR family
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atf03000
]
Ach5_06300 (kdgR)
Transcription factors [BR:
atf03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Ach5_06300 (kdgR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_5
TrmB
HTH_20
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AKC06409
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All DBs
Position
circular:668752..669681
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AA seq
309 aa
AA seq
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MFHYLELDFTKWNYSLGRRLMSRQMTVDVAMPDYKKPNDSEHEVVPAVKRKKESVTGTLG
KAVSLLELIALAEKPMRFTDVVEACGQPRGTVHRQLAHLVAEGLVDHVADQTYVVGLRLL
QLAAKAWSSNDLRSVAAPHLAALQEATQESVHLAVLNGGQVTYLDKMEGKHTLRMHSQVG
KTSPAYCTGVGKAALSMLSPDDLAALAAELDFHRFTQNTIVTPQMLAQDVAAIRSNGYGF
DLQEHEIGIHCVAAPVWAPGRNFLAAISVTGPAYRVDVEQLRKWGPLVRETADQISAELA
CRLSPVANG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgttccattatttggaactagattttactaaatggaattattctcttggccgcagactt
atgtcaagacagatgacggtggatgttgccatgcccgattacaaaaaaccaaatgacagc
gagcatgaggtggttcctgccgtgaagcgaaaaaaggaaagcgtaaccggcacgcttggt
aaggccgtctcgcttctggagcttatcgcccttgccgaaaaaccgatgcgcttcaccgac
gttgtcgaggcttgcggccagccgcgcggcacggtgcaccgccagctcgcccatctcgtg
gccgaaggtctggtcgatcatgtcgccgaccagacctatgtcgtgggtctgaggctgctg
caattggctgccaaggcctggagcagcaatgatctgcgcagcgttgccgcgccgcatctg
gcggcattgcaggaggcgacgcaggaatccgtgcatcttgccgttctgaacggcgggcaa
gtcacctatctggacaaaatggagggcaagcatactttgcgcatgcattcgcaggtgggc
aagacatcacccgcctattgcacaggggtgggcaaggccgcgctgtcaatgctttcccct
gacgatctcgctgcacttgccgcagagctggacttccaccgcttcacgcaaaatacgatc
gtaaccccgcaaatgctggcgcaggatgtggccgccattcgcagcaatggctacggtttc
gaccttcaggagcatgagatcggcattcactgcgttgccgcgccggtatgggcgccgggg
cgcaattttctcgcggcgatttccgtcaccggcccagcctatcgcgtggatgtggagcaa
ctgcggaaatggggtcctctggtgcgcgaaacggccgatcaaatttcggcggaacttgcc
tgcagattatctccggttgcgaatggttga
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