Agrobacterium tumefaciens Ach5: Ach5_09570
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Entry
Ach5_09570 CDS
T03816
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ach5_09570 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_09570 (recO)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ach5_09570 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ach5_09570 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Kazal_CFAI
Motif
Other DBs
NCBI-ProteinID:
AKC06734
LinkDB
All DBs
Position
circular:984229..984993
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AA seq
254 aa
AA seq
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MQWQDEAIILGVKRHGETSVIAEVMTRLRGRHLGMVRGGRSRSMQPVLQAGNRVDVIWRA
RLDDHLGEFRIEPLQLRAAQLMETATAVYGVQAMGALLRLLPERDPHPHLYQALDVILDN
LHDPVDAGELFVRFELAVLNDLGFGLDLTECAATGLRTDLIYVSPKTGRAVCSTAGAPYA
ARMLSLPAFLSEGQSKAADRDSLAAAFRLTGHFLHRHVYDPRGLNENAARDGFVQAALKA
LERKAVLPALDKAV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggcaggacgaggcaatcattctcggcgtaaagcgtcatggcgagaccagcgtc
atcgccgaggtgatgacccgtttgcgcggccgccatctggggatggtgcgcggcgggcgc
tcccgcagcatgcagccggtgctgcaggcgggaaaccgggtggatgtgatctggcgggcg
cggcttgacgaccatctcggcgaattccgcattgagcctttgcagttgcgggcagcgcaa
ttgatggaaacggcaaccgccgtgtatggcgtgcaggccatgggcgcgctgctgcggctt
ctgccggagcgtgacccgcatccgcatctctatcaggcgctcgacgtcattctcgacaat
ctccatgatccggtcgatgctggcgaattgttcgtacggttcgagctggcggtgctgaac
gatcttggtttcggtctcgatctcacggaatgcgcggcaacgggcctgcgcaccgatctc
atctatgtatcgcccaaaacgggcagggcggtctgtagtacggcgggcgcgccctatgcg
gcgcgtatgctttcgcttcccgctttcctgagcgaaggtcagtcgaaggcggccgaccgc
gacagcctcgcggcagcctttcgcctgaccggccattttctccaccggcatgtctatgat
ccgcgcggcctcaatgaaaacgccgcccgcgacggtttcgtgcaggcggcgttgaaggca
ctggagcgcaaggcggtgctgcctgcgctcgataaggcggtatag
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