Agrobacterium tumefaciens Ach5: Ach5_10650
Help
Entry
Ach5_10650 CDS
T03816
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atf03016
]
Ach5_10650 (rnd)
Enzymes [BR:
atf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Ach5_10650 (rnd)
Transfer RNA biogenesis [BR:
atf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Ach5_10650 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AKC06842
LinkDB
All DBs
Position
circular:complement(1095269..1096429)
Genome browser
AA seq
386 aa
AA seq
DB search
MIETTAALAEACKELAKSEFITIDTEFLRETTFWPELCLVQMASPTLEVLVDPLAKGLDL
TPLFELMANPDVVKVFHAARQDIEIIYHLGGLIPHPIFDTQVAAMVCGFGDSISYDQLVQ
RIKNVQIDKSSRFTDWSRRPLTEKQLDYALADVTHLRDVYLALKAQLEREGRSLWLTEEM
DILESRETYDMHPDDAWLRLKSRLRKPTELAILKFVAAWREREARSRNVPRSRVLKDDAI
FEIAQQQPKDTEALSRLRTIPKGWERSSSGTAIIETVNAALALPKEEMPKAPRHSHAPEG
SGAAVELLKVLLKLTADKHGVAAKVIANSEDLDKIASEGEAATVAALTGWRRELFGDVAL
KLINGEVALRFAGKKVEAVDVAVSEA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacgactgccgccctcgccgaagcctgcaaggaactggcgaaatcggaattc
attaccatcgacaccgagtttctgcgtgaaacgaccttctggcccgagctttgtctcgtg
cagatggcgagccctacccttgaggtactggtcgacccgctcgccaagggcctcgacctt
acgccgctgttcgaactcatggccaatcccgatgtcgtgaaggttttccatgcggcgcgt
caggatatcgaaatcatctatcatcttggcgggcttattccgcacccgatcttcgatacg
caggtcgcggccatggtgtgcggtttcggcgattcgatctcttacgaccagctggtccag
aggatcaagaatgtgcagatcgacaaatcctcacgtttcacggactggagccgccgcccg
ctgacggaaaagcagctggattatgcgctggccgacgtcacccatctgcgcgatgtctat
ctggcgctcaaggcgcagctggagcgtgaaggccgctcgctttggctgaccgaagagatg
gacattctggaatcgcgcgaaacctatgacatgcatcccgacgatgcctggctgcggttg
aaatcgcgcctgcgcaagccgactgaactcgccatcctcaaatttgtagcagcatggcgt
gaacgtgaggcgcggtcgcgcaacgtgccgcgctcacgcgtgctgaaagacgatgcgatc
ttcgaaatcgcacagcagcagccgaaggacaccgaggcgctgtcgcggcttcgcaccatc
ccgaagggctgggaacgctcctcctccggcaccgccatcatcgagaccgtgaatgcggcg
ctggcacttccgaaagaggaaatgccgaaggcgccgcgtcacagccacgcaccggaaggc
tccggcgctgccgtggagctgttgaaagttctcctgaagctgacggcagacaagcacggc
gtcgcagcaaaggtcatcgccaacagcgaagatctggacaagatcgcttccgagggcgag
gctgccaccgtggcagcgctgaccggctggcggcgggaactgtttggcgatgtggcgctg
aagctcatcaatggcgaagtggcattgcgtttcgccggcaagaaggtcgaggcggttgat
gtggcggtgagcgaggcctga
DBGET
integrated database retrieval system
