Agrobacterium tumefaciens Ach5: Ach5_11650
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Entry
Ach5_11650 CDS
T03816
Symbol
hupA
Name
(GenBank) transcriptional regulator HU alpha subunit
KO
K03530
DNA-binding protein HU-beta
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atf03032
]
Ach5_11650 (hupA)
03036 Chromosome and associated proteins [BR:
atf03036
]
Ach5_11650 (hupA)
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_11650 (hupA)
DNA replication proteins [BR:
atf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ach5_11650 (hupA)
Chromosome and associated proteins [BR:
atf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Ach5_11650 (hupA)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Ach5_11650 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AKC06942
UniProt:
A0A024IP86
LinkDB
All DBs
Position
circular:1196481..1196756
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AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGLTKADAASAVDAVFETVQNELKSGGDIRLAGFGSFSVSRREASKG
RNPSTGAEVDIPARNVPKFSAGKGLKDAVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgagctcgtctctgctgttgccgaaaaggctggtctcacgaaggcagat
gctgcttccgctgttgatgccgtattcgaaaccgtacagaacgaactgaagagcggtggc
gacatccgtctcgctggcttcggcagcttctccgtaagccgtcgtgaagcctccaagggt
cgtaacccttccacgggtgctgaagtcgatatcccggctcgcaacgtaccgaagttttcc
gcaggcaagggcctgaaggacgccgtcaactcgtaa
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