Agrobacterium tumefaciens Ach5: Ach5_12220
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Entry
Ach5_12220 CDS
T03816
Symbol
gatB
Name
(GenBank) aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00970
Aminoacyl-tRNA biosynthesis
atf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ach5_12220 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
atf03029
]
Ach5_12220 (gatB)
Enzymes [BR:
atf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
Ach5_12220 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
Ach5_12220 (gatB)
Mitochondrial biogenesis [BR:
atf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Ach5_12220 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
AKC06998
LinkDB
All DBs
Position
circular:1255249..1256754
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AA seq
501 aa
AA seq
DB search
MTLVDVRTPDPKRFIPGATGDWEIVIGLEVHAQVLSNSKLFSGASTTFGNAPNSNVSLVD
AAMPGMLPVINEECVKQAVRTGLGLKAKINNRSIFDRKNYFYPDLPQGYQISQFKDPIVG
EGIITISLGPDRQGNFEDIEIGIERLHLEQDAGKSMHDQHPTMSFVDLNRSGVALMEIVS
KPDMRSSDEAKAYLTKLRSIVRYLGTCDGNMDEGSMRADVNVSVRRPGEGFGTRCEIKNV
NSIRFVGQAIEYEARRQIAILEDGGVIDQETRLFDPGKGETRSMRSKEDAHDYRYFPDPD
LLPLEFDDAFVEALKVDLPELPDDKKARFVADLGLSVYDASILVSEKAIADYYESVAAGR
DPKAAANWVINDLLGALNKSGKDIETTPVSPEQLGGIIDLIKAETISGKIAKDVFEIVWN
EGGNPAEIVETRGMKQVTDTGAIEKAVDEIIAANPDQVEKVKAKPALAGWFVGQVMKATG
GKANPQAVQALVKAKLGIEDE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacccttgtagacgtgcgcacccccgacccgaaacgcttcattcccggcgccaccggc
gattgggaaatcgtgatcggcctggaggtgcatgcgcaggttctctccaattccaagctg
ttttccggcgcttcgaccactttcggcaatgcgccgaactccaacgtgtcgcttgtggac
gccgccatgcccggcatgcttcccgtcatcaacgaggaatgcgtcaagcaggccgtgcgc
accggtctcggcctgaaggccaagatcaacaaccgttcgatcttcgaccgcaaaaactac
ttctatccggatttgccgcagggctaccagatttcgcagttcaaggacccgatcgtcggt
gagggcatcatcacgatttcgctcggtccggatcgtcagggcaatttcgaggacatcgag
atcggcatcgagcgcctgcatctggagcaggacgccggcaagtccatgcacgaccagcac
ccgaccatgtccttcgtggacctgaaccgttcgggcgttgcgctgatggaaatcgtctcc
aagcccgacatgcgctcgtcggatgaggcaaaggcctatctcaccaagctgcggtccatc
gtgcgttatctcggcacctgcgacggcaacatggacgaaggctcgatgcgcgccgacgtc
aacgtctccgtgcgccgtcccggcgaaggtttcggcacgcgctgcgagatcaagaacgtc
aactccatccgcttcgtcggccaggccatcgaatatgaggcgcgccgccagatcgccatt
ctcgaagacggcggtgtcatcgatcaggaaactcgcctgttcgatcccggcaagggtgag
acgcgttccatgcgctccaaggaagacgcgcatgactatcgctatttccctgatccagac
ctgctgccgcttgaattcgacgatgctttcgtcgaggcgctgaaggtcgatctgccggaa
ctgcctgatgacaagaaggcccgtttcgtcgccgatcttggcctgtcggtctacgacgcc
tcgatcctcgtttcggaaaaggcgatcgccgattattacgagtcggttgctgccggccgc
gacccgaaggccgccgccaactgggtcatcaacgatcttctcggtgcgctgaacaagtca
ggcaaggacatcgagacgacgccggtttctcccgaacagctgggcggcattatcgatctc
atcaaggcagagaccatttccggcaagatcgccaaggatgtgttcgaaatcgtctggaac
gagggcggcaacccggccgaaatcgtcgagacgcgcggcatgaagcaggtgacggatacc
ggcgccatcgaaaaggccgtggacgagatcatcgccgccaacccagatcaggtcgagaag
gtgaaggcgaagccggcgcttgccggctggttcgtcggccaggtcatgaaggcgacgggc
ggcaaggccaacccgcaggccgtgcaggcgctggtgaaggccaagctcggcatcgaggac
gagtaa
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