Agrobacterium tumefaciens Ach5: Ach5_12970
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Entry
Ach5_12970 CDS
T03816
Symbol
pdhB
Name
(GenBank) pyruvate dehydrogenase beta subunit
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00010
Glycolysis / Gluconeogenesis
atf00020
Citrate cycle (TCA cycle)
atf00620
Pyruvate metabolism
atf00785
Lipoic acid metabolism
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
atf01200
Carbon metabolism
atf01210
2-Oxocarboxylic acid metabolism
Module
atf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Ach5_12970 (pdhB)
00020 Citrate cycle (TCA cycle)
Ach5_12970 (pdhB)
00620 Pyruvate metabolism
Ach5_12970 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Ach5_12970 (pdhB)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Ach5_12970 (pdhB)
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GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
PFOR_II
QRPTase_N
DUF1246
Motif
Other DBs
NCBI-ProteinID:
AKC07073
UniProt:
A0A1B9U817
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All DBs
Position
circular:1334837..1336258
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AA seq
473 aa
AA seq
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MPVEILMPALSPTMEEGTLSKWLKKEGDKVTSGDVIAEIETDKATMEVEAVDEGVIGKLL
IDAGTEGVKVNTPIAVLIQEGESAADISSSAKKEEPKAEAANSDSDAAGGKTREASEEPS
AAKEAAKVPAAPKIEVAADPDIPEGTEMVMTTVREALRDAMAEEMRADEKVFVMGEEVAE
YQGAYKITQGLLQEFGERRVIDTPITEHGFAGIGVGAAMTGLRPIVEFMTFNFAMQAIDQ
IVNSAAKTLYMSGGQMGAPMVFRGPSGAAARVGAQHSQCYAAWYSHIPGLKVVMPYTAAD
AKGLLKAAIRDPNPVIFLENEILYGQSFEVPKLDDFVLPIGKARIHRKGKDATIVSFGIG
MTYAIKAVAELEKLGIDVELIDLRTIRPMDLPTVIESVKKTGRLVTVEEGFPQSSVGDFI
ANQVMRAAFDYLDAPILTIAGKDVPMPYAANLEKLALPNVDEVVQAVKTVCYK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaattcttatgcccgccctttccccgaccatggaggaaggcacgctttcc
aaatggcttaaaaaggaaggcgacaaggtcacatccggcgacgtgattgccgagatcgag
accgacaaggcgaccatggaagtggaagctgtggatgaaggtgttatcggcaagctgctg
atcgacgccggcaccgaaggcgtcaaggtcaacacgccgatcgccgttctcatccaggaa
ggcgaaagcgctgccgacatctcttcttccgccaagaaggaagagccgaaggctgaagct
gcaaattccgattcggatgccgcaggcggcaagacccgcgaagcatccgaggagccgagc
gctgccaaggaagccgcaaaggttccggcagcacctaagatcgaagtcgctgccgatccg
gatattcctgaaggcacggaaatggtgatgacgacggtgcgtgaagcgctgcgcgacgcc
atggccgaagaaatgcgcgcggacgaaaaagtcttcgtcatgggtgaggaagtcgccgaa
taccagggcgcctacaagattacccaaggcctgttgcaggaattcggcgaacgccgcgtt
atcgacaccccgatcaccgagcacggttttgccggtatcggcgtcggtgcggcaatgacg
ggcctgcggcccatcgtcgaattcatgaccttcaacttcgccatgcaggcgatcgaccag
atcgtcaactcggcggcgaagacgctttacatgtcgggcggccagatgggtgcgccgatg
gtgttccgtggcccctcgggtgctgctgcccgcgttggtgctcagcattcgcaatgttac
gccgcatggtacagccatattccgggcctcaaggtcgtcatgccctacacggcagcggac
gccaagggtctcctgaaggcagccatccgcgatccgaatccggtcatcttccttgagaac
gaaattctctacggccagagcttcgaagtgccgaagctcgacgatttcgtgctgccgatc
ggcaaggcgcgcattcaccgcaagggtaaggatgcgacgatcgtttccttcggcatcggc
atgacctacgcaatcaaggcggttgcggaactcgaaaagctcggcatcgacgtcgaactg
atcgaccttcgcaccatccgtccgatggatctgcccaccgtcatcgaatcggtcaagaag
accggtcgtctggtcaccgtcgaggaaggcttcccgcagtcatcggttggtgacttcatc
gccaaccaggtcatgcgtgccgctttcgactatctcgatgcgccgatcctgacgattgcc
ggcaaagacgttccgatgccttacgcggcaaacctcgaaaagctggctttgccgaacgtc
gatgaagtcgttcaggctgtcaaaaccgtctgctacaagtaa
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