KEGG   Agrobacterium tumefaciens Ach5: Ach5_13160
Entry
Ach5_13160        CDS       T03816                                 
Symbol
hfq
Name
(GenBank) host factor-I protein
  KO
K03666  host factor-I protein
Organism
atf  Agrobacterium tumefaciens Ach5
Pathway
atf02024  Quorum sensing
atf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ach5_13160 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Ach5_13160 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atf03019]
    Ach5_13160 (hfq)
   03036 Chromosome and associated proteins [BR:atf03036]
    Ach5_13160 (hfq)
Messenger RNA biogenesis [BR:atf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Ach5_13160 (hfq)
Chromosome and associated proteins [BR:atf03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Ach5_13160 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AKC07092
UniProt: A0AA86KPK0
LinkDB
Position
circular:1355557..1355799
AA seq 80 aa
MAERSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPGQPMQMFESEEGAA
NT seq 243 nt   +upstreamnt  +downstreamnt
atggcggaacgttctcaaaaccttcaggatcttttcctcaataccgttcgtaagcaaaag
atttcgctcacgattttcctgatcaacggcgtcaagctgacgggcgttgtcacttccttc
gataatttctgcgtgcttctgcgccgtgacggtcactcgcagcttgtttacaagcatgcg
atctccaccattatgcccggccagccgatgcagatgttcgagagcgaagaaggcgcagcc
tga

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