Agrobacterium tumefaciens Ach5: Ach5_13160
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Entry
Ach5_13160 CDS
T03816
Symbol
hfq
Name
(GenBank) host factor-I protein
KO
K03666
host factor-I protein
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf02024
Quorum sensing
atf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ach5_13160 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ach5_13160 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atf03019
]
Ach5_13160 (hfq)
03036 Chromosome and associated proteins [BR:
atf03036
]
Ach5_13160 (hfq)
Messenger RNA biogenesis [BR:
atf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ach5_13160 (hfq)
Chromosome and associated proteins [BR:
atf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Ach5_13160 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
AKC07092
UniProt:
A0AA86KPK0
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All DBs
Position
circular:1355557..1355799
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AA seq
80 aa
AA seq
DB search
MAERSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPGQPMQMFESEEGAA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgttctcaaaaccttcaggatcttttcctcaataccgttcgtaagcaaaag
atttcgctcacgattttcctgatcaacggcgtcaagctgacgggcgttgtcacttccttc
gataatttctgcgtgcttctgcgccgtgacggtcactcgcagcttgtttacaagcatgcg
atctccaccattatgcccggccagccgatgcagatgttcgagagcgaagaaggcgcagcc
tga
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