Agrobacterium tumefaciens Ach5: Ach5_19460
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Entry
Ach5_19460 CDS
T03816
Symbol
pcrA
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03420
Nucleotide excision repair
atf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ach5_19460 (pcrA)
03430 Mismatch repair
Ach5_19460 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_19460 (pcrA)
Enzymes [BR:
atf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ach5_19460 (pcrA)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ach5_19460 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Ach5_19460 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Peptidase_M13
DEAD
Motif
Other DBs
NCBI-ProteinID:
AKC07722
LinkDB
All DBs
Position
circular:1985066..1987540
Genome browser
AA seq
824 aa
AA seq
DB search
MSNSFDDMPFFDEEPEAPRKATNNADAGNAGGLGIAARAMAARDQARPTPDYLSGLNPEQ
REAVETLDGAVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERI
GVLVGGAVEGMPWLGTFHSIGVKLLRRHAELIGLKSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYTAYQNRLKTLNACDFGD
LLLHPISIFRRNPDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRPKGEPQNVCCVG
DDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGTAGHLIAHNEGRLGKT
LFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKNHKLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTIRN
LHDYARARDIPMLAAATDIIETDELKPKARKALFDVVQDFRRWQGLLENTEHTTLAEQIL
DESGYTAMWQADKTAEAPGRLENLKELIRSMEAFESLRGFLEHVALVMDAEQNENLDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSNYGGYAGRGGYGQSRFDKAEPFANN
YSTPGWKRAQANKSDATRDNWGTRSGHAVERIGYGESGPRARTIDGELVAKSVADTPSKF
VVGDRVFHIKFGNGNISAIEGNKLTIDFDRAGQKRVLDGFVEKV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagttttgacgatatgccgttcttcgacgaagaacctgaggcgccgcgcaag
gcgacgaacaatgccgatgcaggcaacgccggcgggcttggcattgccgcgcgcgccatg
gcggcacgcgatcaggcccggcccacgcccgactatctgtccggtcttaacccggaacag
cgcgaagccgtggagacactggacggcgcggttctggtgcttgcgggcgccggcaccggc
aagacccgcgttctcaccacccgcatcgcccatattctggcgaccggacgcgcctatccc
agccagattctggccgtgaccttcaccaacaaggccgcgcgcgagatgaaggaacgtatt
ggcgttctggtcggcggcgcggttgagggcatgccctggctcggcaccttccactccatc
ggtgtcaagctcttgcgtcgccatgccgaactcatcggcctgaagtctgatttcaccatt
ctcgacaccgatgatgtggtgcggctgatcaaacagcttatccaggccgaaggtcttgat
gacaagcgctggccggccaaacaattcgccggcatgattgacggctggaagaacaagggg
ctgacgccgccggatattcccgagggcgattcccgtgcctttgccaatggcaagggccgc
gaactttacacggcctatcagaaccggctgaaaacgctgaacgcctgcgatttcggcgat
cttctgctgcaccccatcagcatcttccgccgcaatcccgatattctgaaggagtaccac
cagaaattccgctacattctggtggacgagtatcaggacaccaatacggcgcaatatatg
tggctcaggcttcttgcccagcgccccaagggcgagccacaaaacgtctgctgcgtcggc
gacgatgaccagtcgatctatggctggcgcggcgccgaagtggacaacatcctgcgcttc
gacaaggattttcccggtgccaaggtcatcaagctggagcgcaactaccgctccaccgag
catattctcggcaccgccggccatctgatcgcccataatgaagggcgtctcggcaagacc
ctgttcaccgagcgcagcagccccgacgatgagaaggtcgtggtgcatgcggcctgggat
tccgaagaggaagcccgcgccgtcggtgaagaaatcgagcagcttcagcgcaagaaccac
aagctgaacgacatggccattctcgttcgcgcctccttccagatgcgcgagttcgaagac
cgtttcgtcacgctaggcctcaattaccgcgtcatcggcggtccgcgcttctacgagcgt
ctcgaaatccgcgatgccatggcctattttcgccttgtctgccagccggccgacgatctg
gccttcgagcgcatcgtcaacacccccaagcgcggcctgggcgacacgaccatccgcaat
ctgcatgattacgcccgcgcccgcgacattccgatgctggcggcagcgaccgacatcatc
gagaccgacgagctgaaaccgaaagcgcgcaaggcgctgttcgacgtggtgcaggatttc
cgccgctggcaggggcttctggaaaacaccgaacacaccacgcttgccgagcagatcctg
gacgaaagcggctatactgccatgtggcaggccgacaagacggcggaagcgcccggccga
ctggaaaacctgaaggaactcatccgctcgatggaggccttcgagagcctgcgcggtttc
ctcgagcatgtcgcgctcgtcatggatgccgagcagaacgaaaatctcgatgccgtctcc
atcatgacgctgcattccgccaaggggctggaattcgacaccgtcttccttcccggttgg
gaagaaggtctgttcccgcaccagcgggcgctggacgaaggcggccgctccggtctggag
gaagaacgtcgtctagcctatgtcggcatcacccgcgccaagaagctttgccatatctgg
ttcgtatcgaaccggcgtatccatggtctgtggcaatccaccctgccctcgcgttttctc
gatgaactgccgccagcgcacgtggatgtcgcggcatccgacagcaattacggtggttac
gccggacgcggcggttatggccagtcccgtttcgacaaggcggaacccttcgccaacaac
tactccacccccggctggaaacgtgcccaggccaacaagtccgacgcgacccgcgataac
tggggcacacgctccggccatgcggtcgagaggattggttatggcgaaagcggcccccgc
gcccgcacgatcgacggcgaactggtggccaaatcggttgccgacacaccgtcaaaattc
gtggtaggagaccgcgttttccatatcaaattcggcaatggcaacatctccgccatcgag
ggtaacaaactgaccatcgattttgaccgcgccggacaaaagcgtgtgctggatggattt
gtggaaaaggtttga
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