Agrobacterium tumefaciens Ach5: Ach5_19650
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Entry
Ach5_19650 CDS
T03816
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03030
DNA replication
atf03430
Mismatch repair
atf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ach5_19650
03430 Mismatch repair
Ach5_19650
03440 Homologous recombination
Ach5_19650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atf03032
]
Ach5_19650
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_19650
Enzymes [BR:
atf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ach5_19650
DNA replication proteins [BR:
atf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ach5_19650
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ach5_19650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Vps26
Motif
Other DBs
NCBI-ProteinID:
AKC07741
LinkDB
All DBs
Position
circular:complement(2001791..2002492)
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AA seq
233 aa
AA seq
DB search
MTGCLWKRGLPKPVLFDANPVYAGMKQRESLLKTIAIDFETANEERGSACSIGLAWIEDG
EIVRVEERLIRPKDMRFSPFNIAVHGIRPADVEDAPEFPDVMEEFIDDFHGATMIAHNAA
FDFSVMRASFDKYRQSYPDLSYLCSVKIARHVWPQLASHKLNVIAHHLQLRFVHHNAAED
AVVCAAASIAAARALRVDHIRDLPEKIGMVAGRLTSTGYQPCSMKKRVVSRVA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
ttgactggatgcttgtggaagcggggtctaccgaagccggttctctttgacgccaatccg
gtctatgccggaatgaaacaacgggaatcactcttgaaaaccatcgccatcgatttcgag
accgccaatgaggaacggggtagcgcctgctccatcgggcttgcgtggatagaagacggt
gagatcgttcgcgtcgaggaacggctcatccggccgaaggacatgcggttctcgcccttc
aatattgccgtgcacggtattcgccctgccgatgtagaggatgcgccggaattccctgat
gtgatggaagaattcatcgacgatttccacggcgccacgatgattgcccacaatgccgcc
ttcgatttcagcgtcatgcgggcatccttcgacaaataccggcagtcctatcctgatctt
tcctatctttgcagcgtcaagattgcacgccatgtctggccgcagctggcgtcgcacaag
ctgaatgtgattgcccatcacctccagttgcgtttcgtgcaccataacgccgccgaagat
gctgtcgtctgcgcggcagcgtcgattgcggcggccagggcgttgcgcgttgaccatatc
cgcgacctgccggaaaagatcggcatggttgccggccgtctcacttccacgggctatcag
ccttgcagcatgaaaaaacgtgttgtctcgcgggttgcgtaa
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