Agrobacterium tumefaciens Ach5: Ach5_19850
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Entry
Ach5_19850 CDS
T03816
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00470
D-Amino acid metabolism
atf00550
Peptidoglycan biosynthesis
atf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ach5_19850 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ach5_19850 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
atf01011
]
Ach5_19850 (murD)
Enzymes [BR:
atf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Ach5_19850 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
atf01011
]
Precursor biosynthesis
Amino acid ligase
Ach5_19850 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
MurD-like_N
TrkA_N
KARI_N
NAD_binding_2
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AKC07761
LinkDB
All DBs
Position
circular:complement(2025739..2027148)
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AA seq
469 aa
AA seq
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MIPVSSFRGKKVALFGLGGSGLVTARALVAGGADVVAFDDNPDSVAKAEAEGITTADLRT
IDWHSFSSFVLAPGVPLTHPKPHWSVDLARAAGVEIIGDIELFIRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKASGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTI
NPTAGILLNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSYSTLIADRIERAGVK
VERISKRNVVSEGLYAEGSRILRAHGGKSSLLVDLDGIQTLRGSHNAQNAAAAIAACLAV
GVSEEDVRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSYERIYWIAGG
LPKAGGIASLAPLFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADAEKD
ATAGNIVMLSPACASFDQYKNFEIRGDSFVAQVAALDGVTMLVHSGKGG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtctcgtcgttcagaggtaagaaggtcgcgcttttcgggcttggcggttcg
ggccttgtcacggcccgggcgctggttgccggcggggcggatgttgttgctttcgacgat
aatcccgacagcgtcgccaaggctgaggccgaagggataacgacggctgatcttcgaacg
atagactggcattccttttcgtctttcgtgctcgcacccggcgtgccgctaacgcatccg
aagccgcactggtcggtcgatcttgcccgggcggcgggtgtcgagattatcggcgatatc
gagcttttcattcgcgagcgccgggcgcatgcgccggattgccccttcatcgccatcacc
ggcacgaacggcaaatccacgacgaccgcactgattgcccatatcctcaaggcttcgggc
cgcgatacacaactcggcggcaatatcggcactgccgtgctgagcctcgatccgccgaaa
gcgcaacgtttctatgtcgttgaatgctcgtcctaccagatcgatctggcgccgacgatc
aatccgacggccggcattctgctcaatctgacgcccgaccatctcgaccggcacggcacc
atgcagcattatgccgatgtcaaggaacggcttgtggcgggcagtggcacggcaattgtc
ggcgttgatgacagctattccacgctgatcgccgaccgcatcgagcgtgccggcgtgaag
gtggagcgcatttccaagcgcaatgtcgtttccgaaggtctttatgccgaaggcagccgc
atcctgcgggcgcatgggggcaagtcctcgctgctggtcgatctcgacggcatccagacg
cttcgcggcagccacaatgcccagaatgcagcggctgcaattgccgcatgccttgccgtc
ggcgtttccgaagaggacgttcgcgcaggtctcaagtccttccccggcctaaaacatcgc
atgcagccggtcggtcggcgcggcaatgtcactttcgtcaatgacagcaaggcaaccaat
gccgatgcagcagcaccggccttgtcgagctatgagcgcatctattggatcgcgggcggt
ctgccgaaggccggcggcattgccagccttgcgcccctgtttccgcgcatcgccaaggct
tatctgatcggcgaggccgcggcggaatttgcagcgacgctcggcgaagccgtgccttat
gaaatatccggcacgctggacaaggcggtgcagcatgcggcggcggatgcggaaaaagat
gcgacggccggcaatatcgtgatgttatccccggcttgcgcaagcttcgaccaatataag
aactttgaaatcagaggtgattcgttcgtcgcgcaggttgcggcgctcgatggcgtgacg
atgctcgttcactctggaaaagggggctga
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