Agrobacterium tumefaciens Ach5: Ach5_19870
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Entry
Ach5_19870 CDS
T03816
Symbol
murF
Name
(GenBank) UDP-MurNAc-pentapeptide synthetase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00300
Lysine biosynthesis
atf00550
Peptidoglycan biosynthesis
atf01100
Metabolic pathways
atf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ach5_19870 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ach5_19870 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ach5_19870 (murF)
Enzymes [BR:
atf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Ach5_19870 (murF)
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1858
Motif
Other DBs
NCBI-ProteinID:
AKC07763
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Position
circular:complement(2028276..2029682)
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AA seq
468 aa
AA seq
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MIAITAGRPVGNLPTGITGISIDSRTVKAGEAFFAIKGDRVDGHDYTSFAVANGAGLLVV
AEGKLPALGRLTVPMIVVEDVLAALGKLAIAARERTTARIIAVTGSVGKTTTKEMLRQAL
APSGRVHAAVASFNNHWGVPLTLARMPADTEFGVFEIGMNHSGEIRPLVKMVRPHVAIIT
TIAPAHLGNFKNIEEIASAKAEIFEGLEEGGFVILNRDNAQFEQLEEAAQDQGIEHILTF
GQHAKADFRLADFESTSTGSTIWAILNGETSELHLNIPGRHIADNAMAVLGAVAVTGANL
DRAFEVLGTLEAVKGRGQRHRLTIESGSFLLIDESYNANPASMRAAIAVLAETETQGYGR
RVAVLGDMLEMGEFSAQLHEELAGPLLAGGIEHVWLAGEAMAALRDALPDSVTVIWFPTT
AELADFALQWVQPGDALMVKSSLGLGFGKIVAALLDKYPAFPETERQV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccatcacggcagggcgtcccgtcgggaacctgccgaccggtatcaccggcatt
tccatcgacagccggactgtgaaggctggtgaagcatttttcgccatcaagggcgatagg
gtcgacggccatgactatacgagttttgctgtcgccaatggtgcgggcctgctggtagtc
gccgaaggcaagctgccggccctcggccgcctgaccgtgcccatgatcgtcgtggaggat
gtcctcgcggcgcttggcaagctcgccattgcggcgcgtgaaaggaccacggcgcggatc
atcgcggtgaccggttctgtcggcaagacgacgacgaaggaaatgttgcggcaggctctg
gcgccttcgggccgggttcatgcggcggtggcgtccttcaacaatcactggggtgtgccg
ctgacgttggcgcgcatgcccgccgataccgaattcggcgttttcgaaatcggtatgaac
cactccggcgagatccgtccgctggtcaagatggtacgtccgcatgtcgcgatcattacc
accatcgcgccagctcatttgggcaatttcaagaacatagaagagatcgcgagcgccaag
gcggagatattcgaagggttggaggagggcggcttcgtcatcctcaaccgtgacaacgcc
cagttcgagcaacttgaagaagcggcgcaggaccagggtatcgagcatatcctgaccttc
gggcagcatgccaaggccgatttccggctggccgatttcgaaagcacgtccacaggctcg
accatctgggcgatcctgaacggcgaaacgagcgaattgcacctgaacattcccggcagg
catattgccgacaacgccatggcggtgcttggcgctgttgccgttaccggcgccaatctc
gaccgcgccttcgaggtgctcggaacgctcgaggcagtcaaggggcgcggacagcgccat
cgcctgacgattgaaagcggttccttcctgctgatcgatgagagctacaacgccaacccc
gcctccatgcgggcggcgattgccgtgcttgcggaaacagaaacgcagggttatggccgt
cgcgttgccgttctcggcgacatgctggagatgggtgaattctcagcccagctacacgag
gaactggcggggccgctgctagccggtggtatcgaacatgtctggctggcgggggaggcg
atggccgcccttcgcgatgcgcttccggacagtgtaactgtcatctggttcccgacgaca
gctgaacttgccgattttgccctgcaatgggtgcaaccgggcgatgcgctgatggtaaaa
tcgtcacttgggctgggtttcggcaagattgtcgcggcactgcttgacaagtatccggca
ttccccgagacggaacgccaagtctga
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