Agrobacterium tumefaciens Ach5: Ach5_20590
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Entry
Ach5_20590 CDS
T03816
Symbol
carB
Name
(GenBank) carbamoylphosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00220
Arginine biosynthesis
atf00240
Pyrimidine metabolism
atf00250
Alanine, aspartate and glutamate metabolism
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Ach5_20590 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Ach5_20590 (carB)
00220 Arginine biosynthesis
Ach5_20590 (carB)
Enzymes [BR:
atf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Ach5_20590 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
CoA_binding_2
YopH_N
GramPos_pilinBB
Motif
Other DBs
NCBI-ProteinID:
AKC07834
LinkDB
All DBs
Position
circular:2111755..2115243
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AA seq
1162 aa
AA seq
DB search
MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP
EAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKKHEAARAELKAKLSGAELDK
ALDDLENQWNLGETDRKQRYMAHAIAIAAQAIDHVGLPAIIRPSFTLGGTGGGIAYNRSE
FFDIVSGGLDASPTTEVLVEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMGVHTGDS
ITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS
SALASKATGFPIAKIAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLDEIEIPGFEEGEGSKNAI
RAAIGTPTPDRLRMVAQALRMGMTEEEVHENSKIDPWFIAQFKAIVDMEARVREQGLPQD
AENLRMLKAMGFSDARLAILTGKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYMYS
TYEIPFVGAARSEAQVSGRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIMIN
CNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEALEK
NGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLVVRP
SYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFDSY
LTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQTTA
LAKALNVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEKLD
AAIAAYGKKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALAFAK
SQLGAGVDLPRSGTVFVSVRDDDKDRVLPAIRILVESGFRVLATGGTQRFLAEQGINAEK
INKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAGAEAA
ALAIKALKAGNLEVKPLQSYFL
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgccaagatatcaagtccatcctcatcattggcgcaggaccgatcgtcatc
ggccaagcatgtgaattcgactattccggcacccaggcctgcaaggcgctgaaggaagag
ggttaccgggtcattctggtcaactccaacccggccaccatcatgaccgatccgggcctc
gccgacgcaacctatgtcgagccgatcaccccggaagtcgttgccaagatcatcgccaag
gaacgtccggacgcgctgctgcccaccatgggcggccagaccgcgctcaacaccgcgctg
tccctgaagcgcatgggcgttctcgaccgctacaatgtggaaatgatcggcgccaagccc
gaagccatcgacatggccgaagaccgcgccctcttccgcgaggccatggctcgcatcggc
cttgagacgccgaagtccatgctggccaacgccactgaaatcaaggacgccgatcgcaag
aagcacgaagctgcccgcgccgaactcaaagcgaagctttccggtgcggaactggacaag
gcgctggacgatctggaaaaccagtggaaccttggcgagaccgaccgcaagcagcgttac
atggcgcatgcgatcgcaatcgccgcccaggcgatcgaccatgtcggcctgcccgccatc
atccgcccatccttcacgctcggcggcaccggcggcggcattgcctataatcgctccgaa
ttcttcgacatcgtctcgggcggcctcgacgcttcgccgaccaccgaggtgctggtcgaa
gaatcggttctcggctggaaggaatatgagatggaagtggtccgcgacaccgcggacaat
tgcatcatcatctgctccatcgaaaacatcgatccgatgggggtccacaccggcgattcc
atcaccgttgcgccagcgctgacgctgaccgacaaggaataccagatcatgcgcaacgcc
tcgattgcggtgctgcgtgagatcggcgtggaaaccggcggctcgaacgtacagttcgcc
gtcaacccgaaagacggccgcctcgtcgtcatcgaaatgaacccgcgcgtttcgcgctcg
tctgctctcgcctccaaggcgaccggcttcccgatcgccaagatcgccgccaagctcgcc
atcggctatacgctcgacgagctggaaaacgatatcaccggcggcgcgacgcctgcctcg
ttcgaaccgtcgatcgactacgtcgtcaccaagatcccgcgtttcgccttcgagaagttc
ccgggcgcctcgccgatcctcaccacggccatgaagtccgtcggtgaagtcatggccatc
ggccgcaccttcgcagaatcgctgcagaaggcgctgcgcggcatggaaaccggcctcacc
ggtctcgatgaaatcgaaatccccggctttgaagagggcgaaggctccaagaacgccatc
cgcgccgccatcggcacgccgacgccggatcgcctgcgcatggtcgcccaggcgctgcgc
atgggaatgacggaagaagaagtccacgaaaactcgaagatcgacccttggttcatcgcc
cagttcaaggcaattgtggacatggaagcccgtgtccgtgagcaaggcctgccgcaggac
gcagagaacctgcgcatgctcaaagccatgggcttttccgacgcccgcctggcaattctg
acgggcaagcgcccgaaggaagtggccgagctgcgcaacagcctcaatgttcgcccggtc
ttcaagcgcatcgatacctgcgcggcagaattcgcctcgcccacagcctacatgtattcg
acctatgaaatccccttcgtcggcgccgcccgctctgaagcgcaggtttccggccgcaaa
aaggtcgtcatcctcggcggcggtccgaaccgtatcggccagggcatcgagttcgactat
tgctgctgccatgctgccttcgcgctgaaggatgcaggcttcgaagcgatcatgatcaac
tgcaatccggaaacggtttcgaccgactacgacacctccgaccgcctctatttcgaaccg
ctgacggccgaagacgtgatcgagatcatgcgcgccgagcaggaaaagggcgaattggtc
ggcgtcatcgtgcagttcggcggccagacgccgctgaagctggccgaagcgctggaaaag
aacggtatcccgatcctcggcaccgcgcctgacatgatcgaccttgccgaagaccgcgac
cgcttccagaagctgctgatgaagctcgacctcgcccagccgaacaacggcattgcctat
tcggttgaacaggcgcgcctcgtcgcttcggaaatcggcttcccgctggtcgtgcgtccg
tcctatgttctgggtggccgcgccatgcagatcatccattcggaaggccagctccagacc
tatctgctcgacacggttccgggcctcgtgccagaggacatcaagcagcgttacccgaac
gacaagaccggccagatcaacaccctgctcggcaagaacccgcttctgttcgacagctac
ctgaccaacgccgtcgaagtcgacgtcgatgcactgtgcgacggcgaaaacgtcttcgtt
tcgggcatcatggagcacatcgaagaagccggtatccactcgggcgactcggcctgctcg
ctgccttcccgttcgctgagcaaggaaaccctcgacgagctggaacgccagacgacggcg
cttgcaaaggcgctcaacgtcggtggcctgatgaacgttcagtacgcgatcaaggacggc
acgatctacgttctcgaagtcaacccgcgcgcctcgcgcacggtgcccttcgttgcaaaa
accatcggtgcgccgatcgccaagatcgctgcccgcgtcatggccggcgaaaagcttgat
gcggcgattgccgcttacggcaagaagcccgatccgcgcaacctgaagcacatcgccgtc
aaggaagccgttttcccgttcgcccgcttcccgggcgtcgacattctgctcggaccggaa
atgcgctcgaccggcgaagtcatcggcctcgacaccgatttcgcactcgccttcgccaag
agccagctcggcgccggcgtcgacctgccgcgctccggcaccgtcttcgtctcggtgcgc
gacgacgacaaggaccgcgtattgcccgcaatccgtattctggtcgagagtggcttcagg
gtactggcaaccggcggcacccagcgtttccttgctgaacagggcatcaacgccgagaag
atcaacaaggtgcaggaaggtcgtccgcatatcgaagacgccatccgcaaccggcaggtc
cagctggtcatcaacaccaccgacagcaacaaggcgatttccgactcgaagtcgctgcgc
cgcgcaacgctgatgcagaaggtgccctactacacgacgatggccggtgccgaagcagca
gcccttgccatcaaggcgctcaaggccggcaacctggaagtgaagcccttgcagagctac
ttcctgtaa
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