Agrobacterium tumefaciens Ach5: Ach5_20610
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Entry
Ach5_20610 CDS
T03816
Symbol
dpo
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ach5_20610 (dpo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_20610 (dpo)
Enzymes [BR:
atf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Ach5_20610 (dpo)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ach5_20610 (dpo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AKC07836
LinkDB
All DBs
Position
circular:complement(2116619..2118064)
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AA seq
481 aa
AA seq
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MYGPVLEGRGDFGEWRDAARAALAANVPPEAIDWRLRDEKAGLLDFAGEPLPAARADDVQ
VSVPASFVTLAQAIICHSDPGRFALLYRLVWRLKRERALLQFKSDADVFEARQLEKSVRR
DCHKMTAFVRFKELSLPQGQGGRRRFVAWFEPDHFIVERTAPFFQRRFTDMDWLIATPNG
SARWDGNVLETSRQAASKPELTDETDELWRTYYANIFNPARLKIKAMTAEMPKKYWKNLP
EAELIPGLVLGAEARVLEMAAKAASQPQPFHHRLQAAASAREEPPPAPDGTLASLAREAG
QCTRCALHCKATQTVFGMGPEDAKVMIVGEQPGDHEDLAGKPFVGPAGQLFDRTLVEVGI
DRKKLYVTNAVKHFKYEARGKRRIHQRPDAGEVQQCRWWLNKEIELVRPKLIVAMGATAL
YALTGGKEKVSEVRGRPIPMQEERTLFVTVHPSYLLRLPDSQQKVAEMQNFRNEIDFIRL
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcccggttctggaagggcggggcgatttcggcgagtggcgtgatgcggcgcgc
gcggctctcgccgccaatgtgccgccggaggcgattgactggcggttgcgggatgagaaa
gccgggcttctcgattttgccggagagcctttgccggcggcccgtgcggatgacgtgcag
gtgtccgttccagcctccttcgtgactttggcgcaagcgattatctgtcatagcgatccg
ggtcgtttcgcactgctttaccggttggtgtggcggctgaagcgggagcgcgccctgttg
cagttcaagtccgatgcggatgttttcgaagcccggcagcttgaaaaatcggtccgccgc
gattgtcacaagatgacggcctttgttcgcttcaaggaattatccttgccgcaggggcag
ggcgggcggcggcgcttcgtcgcatggttcgagccggatcacttcatcgtcgagcgcacg
gccccgtttttccagcggcggttcacggatatggactggctgatcgcgacaccgaacggc
tccgcgcggtgggacggaaacgtgctggagacatcgcggcaggccgcgtccaagcctgag
ctgacggatgaaacggacgagctgtggcgaacctattatgccaacatattcaatccggcg
cgtctgaagataaaagcgatgacggcagagatgccaaagaaatactggaaaaatttgccg
gaagccgagcttattccaggtctcgttcttggtgccgaggcgcgggtgctggagatggcg
gcaaaggctgcgagccagccgcaaccattccatcaccgcctgcaggccgcggcctcggcg
cgtgaagagccgccaccggcgccggacggtacgctcgcttcattggcgcgggaggctggc
caatgcacgcgctgcgccctgcattgcaaggcaacgcagacagtgttcggcatgggacct
gaagatgcgaaagtgatgatcgtcggggagcagccgggagatcacgaggatcttgccgga
aaacctttcgtcggtcccgctggtcagttgttcgaccggacattggttgaagtcggtatt
gaccgcaaaaagctttatgtcaccaacgccgtcaaacacttcaaatacgaggcccgcggc
aagcggcgcattcaccagcggccggatgcgggcgaggtgcagcaatgccgctggtggctt
aacaaggaaatcgagctggtacggccgaagcttatcgttgccatgggtgcaactgcgctt
tatgcgctgacaggcggaaaggaaaaggtgtccgaggttcggggtcgcccgataccgatg
caggaggagcggacgctttttgtcacggtgcacccttcctatcttcttcgccttcccgac
tcgcagcagaaggtggcggaaatgcagaatttcaggaatgaaattgattttataagatta
ttctaa
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