Agrobacterium tumefaciens Ach5: Ach5_21200
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Entry
Ach5_21200 CDS
T03816
Symbol
vcaM
Name
(GenBank) multidrug ABC transporter ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ach5_21200 (vcaM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atf02000
]
Ach5_21200 (vcaM)
Transporters [BR:
atf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Ach5_21200 (vcaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_29
DUF87
AAA_16
nSTAND1
Septin
Motif
Other DBs
NCBI-ProteinID:
AKC07895
LinkDB
All DBs
Position
circular:complement(2173527..2175503)
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AA seq
658 aa
AA seq
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MEHSSPFFISRTLPKYNLFPNALRLFPLRESAYIRIMVITRIFEFFENWIKPFARKDDLR
PPEKTSGFIWFYISQAKAPFLAMLVLGGLTAAIEAALFWFVGRLVDILSTVKPEEGWAGL
LAAHGGELVGMLVLIGIVRFIVTMVTALVDQQIITPGFYNLVRWQSYMHVARQSLTFFQN
DFSGRIVTKVWSGGQAAGDLVTSLMESVWFVGIYSVSMLLLIGGLDWRLAVVVLVWVLIF
SLLARYFVPRIRSHSKETAEAASMLSGRMVDAYSNIQTLRLFGRDDANDRYMRQGFDIFQ
NATMTFTRFITGVRASMALLSGVMITSMAALCIDLWLSGKISSGAVAFTLALVLRLNFLL
GRLMTQFNGIMRNFGTVQNAAELISQPIGLVDAPDATVLDVKSPSIRFENVSFHYGRANG
VIDNLNLDIKAGEKVGIVGRSGAGKSTLVNLLLRFYDVEKGRILIDGQDIAKVTQESLRT
HIGMVTQDTSLLHRSIRDNIMFGRTDATEAQLLEATRRAKADEFIARLEDQRGRTGFEAH
VGERGVKLSGGQRQRIAIARVMLKDAPILVLDEATSALDSEVEAAIQSNLDELMQGKTVL
AIAHRLSTIAALDRLIVMDQGRIVEQGSHSDLVSQGKLYSELWARQSGGFLAVEEAAQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtggaacattcttcgccctttttcatttcccgaacgttaccgaaatataatctcttccct
aacgctctgcggctgttcccgctccgggaatccgcctatatccggatcatggtcattacc
cgcatcttcgagtttttcgagaactggataaagcccttcgcccgcaaggacgatttgcgg
ccgccggaaaagacgtccggtttcatctggttctatatctcgcaggccaaggcgccgttt
cttgccatgctggtgctgggcgggttgacggctgccattgaggctgcgcttttctggttc
gtcgggcggctggtcgacattctctcgaccgtcaagccggaagagggctgggctggactg
ctggcagcccatggcggcgaactcgtcggcatgctggtgttgatcggcatcgtgcgtttt
atcgtcaccatggtgaccgcgctggtggaccaacagatcatcacgcccggcttttacaat
ctggtgcgctggcaatcctatatgcatgtggcgcggcaatcgctgacctttttccagaat
gatttttccggccgcatcgtcaccaaggtctggtcgggcgggcaggcggcaggcgatctt
gtcacgtcgctgatggaaagcgtctggttcgtcggcatctactccgtctcgatgctgctg
ctgatcggcgggctggactggcggcttgccgtcgtcgtcctcgtctgggtgctgattttc
tcgctgctggcgcgttatttcgtgccgcgcatccgctcccattcgaaagaaacggcggag
gcagcctccatgctttccggccggatggtggatgcatacagcaatatccagacgctcagg
ctgttcgggcgcgacgatgccaatgaccgctacatgcggcagggcttcgatatcttccag
aacgccacgatgacgttcacgcggttcatcaccggtgtgcgcgcctcaatggcgctgctg
tcgggtgtgatgatcacgtcgatggcagcgctgtgtatcgacctttggctgtccggcaag
atcagttccggcgctgtcgccttcacgctggcactggttctgcgcctcaacttcctgctc
gggcgattgatgacgcagttcaacggcatcatgcgcaatttcggcacggtgcagaatgcg
gcggagctgatttcgcagccgatcggcctcgtggacgcgccggatgcgacagtgctggac
gtgaaaagtccaagtatccgcttcgaaaacgtcagcttccattatgggcgggcgaacggg
gtcatcgacaatcttaatctcgatatcaaggcgggggagaaggtcggcatcgtcggacgc
tccggcgcgggcaaatccacgctcgtcaatctgctgttgcggttttacgatgtcgagaaa
ggccgcatcctcattgatgggcaggatatcgccaaggtcacccaggaatcactgcgcacc
catatcggcatggtcacgcaggatacgtcgctgctgcaccgttctatcagagacaacatc
atgttcgggcgcacggatgccaccgaagcgcaattgctggaggcgacgcgccgggccaag
gcggatgagttcattgcacggctggaagaccagcgcggccgcacgggtttcgaagcgcat
gtcggcgaacgcggcgtgaaattgtcgggcggccagcgccagcgcatcgccattgcccgc
gtgatgctgaaggatgcgccgatcctcgtcctcgacgaggcgacgtctgcgcttgattcg
gaagtagaagcggcgatccagagcaatctggatgagttgatgcagggcaagacagtgctg
gccatcgcccaccgtctttcaacgattgctgctcttgaccggctgatcgtcatggatcag
ggccgtatcgtcgagcagggcagccattcagatctcgtctcgcagggcaaactttattcg
gaactctgggcgcgacagtcgggcggcttccttgctgtggaagaggcggcccaatag
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