Agrobacterium tumefaciens Ach5: Ach5_21290
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Entry
Ach5_21290 CDS
T03816
Symbol
papS
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ach5_21290 (papS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atf03019
]
Ach5_21290 (papS)
Enzymes [BR:
atf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Ach5_21290 (papS)
Messenger RNA biogenesis [BR:
atf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Ach5_21290 (papS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AKC07904
LinkDB
All DBs
Position
circular:complement(2182710..2183966)
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AA seq
418 aa
AA seq
DB search
MSSLAGRDWFEKPALKRIFALLNADGGEVRIVGGAVRNALMEQPVVDVDMATTLTPDVVV
ERAKAAGIKAVPTGIEHGTVTLVIDGEGFEVTTLRRDVETNGRHAQVAFGTDWQIDAERR
DLTINALYADEKGEIIDLIDGLPDIETGTVRFIGDAAMRISEDYLRILRFFRFFAHYGSG
RPDADGLRASARAKDKLGTLSAERVWSELKKLLSARDPSRALLWMRQSGVLAEILPETEK
WGIDAIHGLVATEQALGWTVDPMLRLAAIVPSDRERLTALAARLRLSKAEAAYLAHWASA
PVIDPEMKETALDRLLYRQGVDGVKTRLKLALASARADLSGGEAAMQKVARLSMLLTRAN
KFHKPGFPLSGADVMAAGVESGPKVGEVLKSLEEKWIEVNFSLDRAALTARLKDMLEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccttgccgggcgggattggtttgaaaagccggcgctgaagcgcatcttcgcg
ctgttgaacgccgatggcggcgaggtgcggatcgtcggcggcgccgtgcgcaatgcgctg
atggaacaaccggtcgtcgatgtcgatatggcgacgacgcttacccccgatgtggtggtt
gagcgcgccaaggcggcgggcatcaaggcggtaccgaccggcatagaacacggtacggtg
acgctggtgatcgacggcgaaggtttcgaggtgacgacgctgcgccgcgatgtcgagacc
aatggccgccatgcgcaggtcgcttttggcacagactggcagatcgatgccgagcggcgc
gatctcaccatcaacgcactttacgccgacgagaagggcgagatcatcgacctcatcgat
ggccttcccgacattgaaaccggcacggtgcgtttcatcggcgatgcggcaatgcggatt
tcggaagattatctgcggattcttcggttcttccgcttttttgcccattatggttccggt
cgtcctgatgccgatggcttgcgcgccagtgcgcgggccaaggacaagcttgggacgctc
tcggccgagcgggtgtggagcgagctgaaaaagctgctttccgcgcgcgatccctcccgc
gccttgctgtggatgcggcaatccggcgtgttggcggaaattcttcccgaaacggaaaaa
tggggtatcgacgccattcacgggctggtggcaaccgaacaggcgcttggctggacagtt
gacccgatgctgcggcttgctgcgatagtgccgtccgacagggagaggctaacggcgctt
gctgcgcggctgcggctgtcgaaggctgaagctgcatatctcgcccactgggcttccgcg
ccggtgatcgatccggagatgaaggagacggcgctcgaccgactgctttaccggcagggc
gttgacggagtgaagacgcggctgaaactggcgcttgcctcggcccgcgccgacctttcg
ggcggtgaggcggcgatgcagaaagtcgcgcgactttcgatgctgctgacgagagcgaac
aagttccacaaacccggctttccgctgagcggcgctgatgtgatggccgcgggcgtggag
tccggtccgaaggtaggcgaggtgctgaaaagcctcgaagaaaagtggatcgaagtcaat
ttctcgctagaccgggcagcgctgaccgcccggctgaaggatatgctggagaattga
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