Agrobacterium tumefaciens Ach5: Ach5_21850
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Entry
Ach5_21850 CDS
T03816
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase C-terminal subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00230
Purine metabolism
atf01100
Metabolic pathways
atf01120
Microbial metabolism in diverse environments
atf01232
Nucleotide metabolism
Module
atf_M00958
Adenine ribonucleotide degradation, AMP => Urate
atf_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Ach5_21850 (xdhB)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
Ach5_21850 (xdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
AKC07960
LinkDB
All DBs
Position
circular:2244972..2247311
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AA seq
779 aa
AA seq
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MDTTSFDKTKTEIDGPVHASLRHDSAHKHVTGSAEYIDDIPEPAGLVHGALGLSDRAHAE
IVSMNLSEVEAAPGVLWVMTGKDVPGENDVSSGGRHDEPLLAETKVEFHGQPIFAVFAES
RDIARKAARKAKIVYKDLPHFTDIDTAIENGGALVIDPMTLKRGDAKLEMDVAPRRLTGT
MRIGGQEHFYLESHIAMAVPGEDDEVTLWSSTQHPSEIQHIVSHILQIPSNAVTVQVRRM
GGGFGGKETQGNQFAALCAIAAKKLNRAVKIRPDRDEDMTATGKRHDFRVDYELGFDEEG
RIHAVDATYAARCGFSSDLSGPVTDRALFHADSSYFYPHVHLTSRPLKTHTVSNTAFRGF
GGPQGMLGAERFIEEIAYAVGKDPLDVRKLNFYGETGSGRTTTPYHQEVEDNIIARVVEE
LEASSEYRARRQAIVEFNKTSPIIRKGIALTPVKFGISFTMTAFNQAGALVHIYNDGSIH
LNHGGTEMGQGLYTKVAQVVADAFQVDIGRVKITATTTGKVPNTSATAASSGTDLNGMAA
YDAARQIRERLIKFAAENWNVPEEEVVFLPNRVRIGLEEIAFNDFIKRAYFARVQLSAAG
FYKTPKIHWDRAAGRGTPFYYFAYGAACSEVSIDTLTGEYMMERTDILHDVGKSLNPAID
IGQVEGAFVQGMGWLTTEELWWDGKGRLRTHAPSTYKIPLASDRPKIFNVQLAEWSENAE
PTIGRSKAVGEPPFMLAISVLEALSMAVASIADYKVCPRLDAPATPERVLMAVERLKKV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggacacgacaagcttcgataagaccaagaccgaaatcgacggccctgtacacgcctcg
ctcaggcacgattctgctcataaacatgtgacgggcagcgccgaatatatcgacgatatt
cccgaacccgccggcctcgttcacggtgcgcttggcctttccgaccgggcccatgccgaa
atcgtctcgatgaacctttcggaagtggaagctgcgccgggcgtgttatgggtgatgaca
ggtaaagacgtgcccggcgaaaacgacgtctcctccggcgggcgtcatgacgagccgcta
ctggccgaaacgaaggttgaatttcacggccagccgatcttcgcggtcttcgctgaaagc
cgcgatattgcccgcaaggccgcccgcaaggcgaaaatcgtctacaaggacctgccgcat
ttcaccgatatcgacacggcgattgaaaatggcggcgcgctcgtcatcgatccgatgacg
ctgaagcgtggcgatgcgaagctcgaaatggacgtggcaccccgccgcctgaccggcacg
atgcggatcggcgggcaggagcatttttatctcgaaagccacatcgccatggccgtaccg
ggcgaggacgatgaggtgacgctgtggagctccacccagcatccaagcgaaatccagcac
attgtcagccacatattgcaaataccgtccaatgccgtgacggttcaggtgcgccgcatg
ggcggcggtttcggcggcaaggaaacgcaaggcaaccagttcgcagctctttgcgccatt
gccgccaagaagctgaaccgggccgtgaaaatccgccccgaccgcgacgaagacatgacc
gccaccggcaaacgccacgatttccgcgtcgattacgagctaggctttgatgaggaaggc
cgcatccacgccgttgacgccacctatgccgcccgctgcggtttttcctctgacctttcc
ggcccggtcaccgaccgcgcgctcttccatgcggattccagctatttctacccgcatgtg
cacctcacctcgcggccgttgaaaacccacaccgtctccaacaccgcttttcgcggtttc
ggcggcccgcagggcatgctcggggctgagcgtttcatcgaggaaatcgcctatgccgtc
ggcaaggacccgctcgatgtccgcaagctcaatttctatggcgagaccggttcgggccgc
accacaaccccctatcatcaggaggtcgaggacaacatcatcgcccgcgtcgtcgaggaa
ttggaagcctccagcgaataccgcgcgcgcaggcaggcaattgtcgagttcaacaagacc
agcccgatcatccgcaagggcattgcgctcaccccggtaaaattcggcatctccttcacc
atgacggccttcaatcaggcgggcgcgctggtgcatatctataatgacggttcgatccac
ctgaaccatggcggcaccgaaatgggccagggcctctacaccaaggtggcgcaggtggtg
gccgatgccttccaggtggatattggccgggtgaaaatcaccgccacgaccacgggcaag
gtgcccaatacgtcggccacggccgcctcgtccggtacggacctcaatggcatggcggcc
tatgacgctgcccgccagatccgtgaaaggctcatcaaattcgctgccgagaactggaac
gtgccggaagaagaggttgtcttcctgccaaaccgggtgcgcatcgggcttgaggaaatc
gccttcaacgatttcatcaaacgagcctatttcgcccgcgtccagctttccgccgccggt
ttttacaagacgccgaaaatccattgggatcgcgccgccggccgcggcacgccgttttat
tatttcgcctatggcgcggcctgttcggaggtgtcgatcgatacactgaccggcgaatac
atgatggagcgcaccgatattctccacgatgtcggcaagtcgctgaacccggccattgat
atcggccaggtggaaggcgccttcgtccagggcatgggctggctgacgacggaggaatta
tggtgggacggcaaggggcggctgcgcacccacgctccctccacctacaagatcccgctt
gcctccgaccggccgaagattttcaacgttcaactggcggaatggtcggaaaacgccgag
cccaccatcggccgctccaaggccgtgggcgaaccgcctttcatgctggcgatctcggtt
ctcgaagcactctcaatggccgtcgcgtccatcgccgactataaggtctgcccacgcctc
gatgcgccggcaacgcccgagcgggtgctgatggcggtggaacggttgaagaaggtgtga
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