Agrobacterium tumefaciens Ach5: Ach5_23130
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Entry
Ach5_23130 CDS
T03816
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atf03021
]
Ach5_23130 (rpoH)
Transcription machinery [BR:
atf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ach5_23130 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AKC08088
UniProt:
A0A1B9SZ47
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All DBs
Position
circular:2369200..2370102
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AA seq
300 aa
AA seq
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MARNSLPTITAGEAGLNRYLDEIRKFPMLEPQEEYMLGKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVKEIATKLQVSEEEVISMNRRL
HGDASLNAPIKASEGESGQWQDWLVDDHESQEAVLIEQDELETRRRMLAKAMGVLNDRER
RIFEARRLAEDPVTLEELSSEFDISRERVRQIEVRAFEKVQEAVQKEALEAARALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagtttgcctacaattacggccggcgaagccggtctcaatagatatctc
gacgaaatccgtaaattcccgatgctggagccgcaggaagagtacatgcttggcaagcgt
tacgccgagcatggcgaccgcgacgccgctcacaagctcgtcaccagccacctgcgcctt
gttgccaagattgccatgggttaccgcggttacggcctgccgattggcgaagtcgtgtcc
gaaggcaatgtcggcctgatgcaggcggtgaagaagtttgatccggaacgcggtttccgt
ctggccacctacgccatgtggtggatcaaggcttcgatccaggaatatatcctgcgttcg
tggtcgctggtgaagatgggtacgactgccaaccagaaacgcctgttcttcaacctgcgc
cggctgaaaggccgtatccaggcgatcgacgatggcgatctgaagccggaacacgtcaag
gaaatcgccaccaagctgcaggtttccgaggaagaagtgatctcgatgaaccgccgcctg
catggcgacgcatcgctgaatgcgcccatcaaggcatccgaaggcgaatccggccaatgg
caggactggctggtggacgaccatgaaagccaggaagccgtgctgatcgagcaggacgag
ctggaaacccgccgccgcatgctggccaaggccatgggcgtgctgaacgatcgtgaacgc
cgcatcttcgaggcccgccgccttgccgaagacccggtaacgctggaagaactctcatcc
gagttcgatatcagccgcgaacgcgtgcgccagatcgaggttcgcgccttcgagaaggtt
caggaagcggtccagaaggaagccctcgaagccgcccgcgcgctgcgcgtggtggatgcg
taa
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