Agrobacterium tumefaciens Ach5: Ach5_23220
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Entry
Ach5_23220 CDS
T03816
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ach5_23220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_23220
Enzymes [BR:
atf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Ach5_23220
DNA repair and recombination proteins [BR:
atf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ach5_23220
Prokaryotic type
Ach5_23220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKC08097
LinkDB
All DBs
Position
circular:complement(2380219..2380911)
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AA seq
230 aa
AA seq
DB search
MAEAGVKLEDSWKRVLSTEFASPYMQKLKDFLLAEKTAGKHIFPKGAEYFRALDLTPLDR
VKVVILGQDPYHGVGQAHGLCFSVQPGVRIPPSLVNIYKELQSDLGIRPVSHGFLESWAK
QGVLLLNSVLTVEESRAASHQGQGWEKFTDAVIRAVNDECEHVVFLLWGSYAQKKAAFVD
QKKHLVLRSPHPSPLSAHNGFFGNGHFSKANAFLVSHSREPIDWQLPETA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcaggcgtcaaactcgaagacagctggaaacgtgttctttccaccgaattc
gccagcccctacatgcagaagctcaaagatttcctgcttgccgagaaaactgctggcaag
cacatctttcccaagggtgccgaatatttccgggcgctggatctgaccccgctcgacagg
gtcaaggtcgtcattctggggcaggacccctatcatggggttggccaggcacatgggctt
tgcttttcggtgcagcccggcgtgcgcattccgccctcgctcgtcaatatctacaaggaa
ttgcagagcgatctgggcatccgccccgtcagtcacggttttctggaaagctgggcgaaa
cagggcgtgcttttgctcaacagcgtgctgacggtggaagaatcgcgcgctgcctcgcat
caggggcagggctgggaaaagttcaccgatgccgtcatccgcgccgtcaatgacgaatgc
gagcatgtggtgttcctgctctggggctcctatgcccagaagaaggcggctttcgtggac
cagaaaaaacacctcgtgctgcgctcgccgcacccttcgccgctttcggcccataacggc
tttttcggcaatggccatttttccaaggcaaacgccttcctggtatcccatagccgtgag
cctatcgactggcaattgccggaaactgcttaa
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