Agrobacterium tumefaciens Ach5: Ach5_24550
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Entry
Ach5_24550 CDS
T03816
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00730
Thiamine metabolism
atf01100
Metabolic pathways
atf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Ach5_24550 (thiC)
Enzymes [BR:
atf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Ach5_24550 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AKC08230
LinkDB
All DBs
Position
circular:complement(2531566..2533389)
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AA seq
607 aa
AA seq
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MNIVAKNIPLVVTTGPHPASTKIHKTGILHPHIRVPMREIAVHPTAGEPPVTVYDSSGPY
TDPLHNVLIEKGLPRLRHDWVVARGDVAAYDGRHVKPEDNGFATGERLTPEFAVRHQPLR
ATEGKAVTQLAYARAGIITPEMEFIAIRENLGREAAKEKLARDGESFGAQIPDYVTPEFV
RQEVASGRAIIPANINHLELEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAIRWG
ADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQALEKVNGIAEDLNWEVFRDTLIEQA
EQGVDYFTIHAGVRLHYIPLTVNRVTGIVSRGGSIMAKWCLHHHKESFLYEHFDEICDIC
RAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTQIAWAKDCQVMIEGPGHVPMHKI
KENMDKQLKTCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRNDVKVGVITYKIAAHAADLAKGHPAAQVRDDALSRARFEFRWEDQFNLSLDPDTAR
SFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGLEAMAARFKEGGELYMPL
TTPADGQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgttgccaagaatatcccgcttgtcgtcacaaccgggccgcatcccgcctcc
acgaaaatccacaaaaccggaattttgcatccacatattcgcgtgccgatgcgcgaaatc
gccgtccacccgacggcgggagaaccgccggtcacggtctatgattcctcgggcccctat
accgatccattgcataacgttttgatcgaaaagggtctgccgcgcctgcgtcacgactgg
gttgtagcgcgcggcgatgtcgcggcttacgacggtcggcacgtcaaaccggaggataac
ggctttgccaccggcgagcggctgacgcctgaatttgccgtgcgccaccagccgctgagg
gccacggaaggaaaagccgtaacgcagcttgcctatgcacgggcaggcatcatcacgccg
gaaatggagttcatcgccatccgcgaaaatctggggcgcgaagcggcgaaggagaagctg
gctcgtgatggggagagttttggcgcgcagatacccgattatgtgacgccagagttcgtc
cgtcaggaagtcgcatcgggtcgcgccatcatcccggccaacatcaatcacctcgagctt
gagccgatgatcatcggccgtaattttctggtcaagatcaacgccaatatcggcaattcc
gccgtcacctcctccatggccgaagaggtggagaagatggtctgggcgatccgctggggt
gccgataccgtcatggacctttcgaccgggcgcaacatccacaatatccgcgaatggatc
atccgcaattcgccggtaccgatcggcacggtgccgctttatcaggcgctggagaaggtc
aacggcattgccgaggacctgaactgggaagtgttccgcgacacgttgatcgaacaggcg
gagcaaggcgtggattatttcaccatccatgccggtgttcggctgcattacattccgctt
accgtcaaccgtgtcaccggtatcgtctcgcgcggcgggtcgattatggccaagtggtgt
ctgcatcatcacaaggaaagcttcctctacgagcatttcgacgagatctgcgacatctgc
cgtgcctatgatgtttccttctcgctgggtgacgggttgcggcccggttcgattgccgac
gccaacgacgccgcgcaatttgccgagctggagacgctcggtgagttgacacagatcgca
tgggcgaaggattgccaggtcatgatcgagggccccggccatgtgccgatgcacaagatc
aaggagaacatggacaagcagctgaagacctgcggtgaggcgcccttttatacgcttggg
ccgctgacgaccgatatcgcccccggttacgaccacatcacttccggcatcggggcagcg
atgatcggctggtttggcacggcgatgctctgctatgtcacgccgaaggaacatctgggt
ctgcctgatcgtaacgacgtgaaggtcggtgtcatcacctacaagatcgcggctcacgcg
gccgatctcgccaaggggcatccggcggcacaggtgcgggacgatgcgctgtcgcgtgca
aggttcgagttccgttgggaagaccagttcaacctgtcgctggatccggacacggcgcgc
tcgttccatgacgagaccctgccgaaggaggcgcacaaggtcgcacatttttgctccatg
tgcgggccgaaattctgctcaatgcggatttcccacgacatccgcgccgaggcgcagaag
gaagggctggaggccatggccgcgcgcttcaaggaaggtggcgagctttacatgccgctc
acgaccccggcagacggccagtag
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