Agrobacterium tumefaciens Ach5: Ach5_25120
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Entry
Ach5_25120 CDS
T03816
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ach5_25120 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_25120 (priA)
Enzymes [BR:
atf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ach5_25120 (priA)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ach5_25120 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
AKC08287
LinkDB
All DBs
Position
circular:complement(2601768..2604059)
Genome browser
AA seq
763 aa
AA seq
DB search
MDFTGVSHYIRAVSFFIPPEHVRHIMAKDSSDLFGALFDPPVLTRTVPVLVPMPAPGPYS
YAVPDDMVVETGSIVQVPLGPRQVFGVVWDDAGEKSVDPKKLRPITKSFECPPLKAEMRR
FIDWVAAYTLSPPGLVARMALRAPAAFDPEPMIEGLRLTEGRPERLTPARERVMELAAEG
HGWTKSGLAHAAGVSTSVVDGLVKQGVFETVFLPAPPVVAEPDPDYAEPRLEGPQKQAAS
EILEDVRKGGFHVSLIDGVTGSGKTEVYFEAVAETLRQGKQVLILLPEIALTAAFLDRFH
DRFGAKPAEWHSDLSPRMREKVWRQAVTGEVKVVAGARSALFLPFDNLGLIIVDEEHDPA
YKQEDRVFYNARDMAVVRARIGDFPVVLVSATPSVESQVNGSSGRYNTIHLHTRFGDAAM
PDLHLIDMRRHPPERGGFLSPVLLRGIGKTIEKGEQSLLFLNRRGYAPLTLCRVCGHRFQ
CPQCSSWLVEHRFRNQLQCHQCGHNEPTPDHCPECGTVDHLVACGPGVERIAEEVEKHFP
EARTIVLSSDLMGVKRLRLELEAIVKGEADIVIGTQLVAKGHNFPLMTLVGIVDADLGLA
NGDPRAAERTFQLLSQVTGRAGRTGLKSHGLLQTYQPQHPVMQAIVSGDASAFYEREIVE
REKAVLPPFGRLASIIVSADTRAEAETHARGLRAAAPQVTGIMLLGPAEAPLALIRGRHR
FRLLVHGRRNSDMQSFLRTLLANGPKERGSVHVQLDIDPQSFL
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtggactttaccggggtcagccattacatccgggcggtttcctttttcattccgccggag
catgttcgccacatcatggcaaaagattcgtccgatctgtttggggctctgttcgacccg
ccggtgctcacgcgcacggtgcccgttctcgtgccgatgccggcgccgggaccctacagt
tatgccgtgcctgacgatatggtggtggagaccggctccatcgttcaggtgccgcttgga
ccacggcaggtcttcggcgtggtgtgggacgatgcaggagagaagagcgtcgatccgaaa
aagctgcggcccatcaccaagagtttcgagtgcccgccgctgaaagcggaaatgcggcgc
ttcatcgactgggttgccgcctacacgctttctccgcccggccttgtggcgcgcatggcc
ctacgcgcgcccgccgccttcgatcccgaacccatgatcgaggggctgcggctgaccgaa
ggcaggccggagcggcttactcccgcccgcgagagagtgatggagctggcggccgagggc
catggctggacgaagagtggccttgcccatgccgccggcgtttctaccagcgttgtcgat
ggtctggtcaagcagggcgtattcgagacggtttttctgcccgcgccgcccgttgtggcc
gagcctgatcctgactatgccgagccgcgactggaaggcccgcagaaacaggcggcatcg
gaaattctcgaggatgtgcgcaagggtggtttccatgtttcactgattgatggtgtgacc
ggctccggcaaaaccgaggtctatttcgaggcggtggcggaaacgctgcgacaaggcaag
caggtcctcatcctgttgccggaaatcgcgctgacggcggccttcctggatcgctttcac
gaccgcttcggcgccaagccggcggaatggcattctgacctgtcgccgcgcatgcgcgaa
aaggtctggcgacaggcggtgacgggtgaggtgaaggtggtggccggcgcgcgctcggcg
ctgttccttcccttcgacaatctcggcctcatcatcgtcgatgaggagcatgacccggcc
tacaagcaggaagaccgcgtcttttacaatgcccgcgacatggcggtcgtcagagcccgg
atcggggatttcccggtggtgctggtctccgccacgccgtcagtggaaagccaggtcaac
ggcagttctggccgctataacaccatccatctgcatacgcgcttcggcgatgcggcgatg
cccgatctgcatctgatcgatatgcgtcgccatccgccggaaaggggagggtttctttcg
ccggttctcctgcgcggcatcggcaaaaccatcgaaaagggcgagcagtccctgctcttt
ctcaatcgtcgcggttacgcgccgctgacgctctgccgggtctgcggtcaccgtttccag
tgcccgcaatgttcgagctggctggtggagcaccggttccgcaatcaactgcaatgccac
cagtgcggtcacaacgagccgacgccggaccattgcccggaatgcggcaccgtcgatcat
ctggtggcctgcgggccgggggtagagcggatcgccgaggaggtggagaaacactttccc
gaggcccgcaccatcgtgctctcctctgacctgatgggcgtcaagcggctgcgtctggag
ctggaggcgatcgtcaagggagaggcggacatcgtcatcggcacgcagctggttgccaag
gggcacaacttcccccttatgacgcttgtcggtattgtcgacgccgatctcgggcttgcc
aatggcgatccgcgcgcagcggagcgaacgttccagctgctctcgcaggtgaccggtcgc
gccgggcgaaccgggctgaaaagccacggcctgttgcaaacctaccagccgcaacaccct
gtcatgcaggcaatcgtgtccggcgatgcatctgccttttacgaaagggagatcgtggag
cgggaaaaagccgttcttccgcctttcggacggcttgcctcaatcatcgtttccgccgat
acgcgtgcggaggccgaaacccatgcgcggggtttaagggcagcagcaccgcaggttacg
ggcatcatgctgctcggcccggcggaagcgccgctggcgcttatccgtggccggcaccgt
tttcgcctgctggtgcatgggcggcgcaattccgacatgcaatccttccttcgaacgctt
ctggccaatggcccgaaggaacggggcagcgtgcatgtgcagctcgatatcgatccgcaa
agtttcctttga
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