Agrobacterium tumefaciens Ach5: Ach5_25270
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Entry
Ach5_25270 CDS
T03816
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00020
Citrate cycle (TCA cycle)
atf00190
Oxidative phosphorylation
atf00650
Butanoate metabolism
atf00720
Other carbon fixation pathways
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
atf01200
Carbon metabolism
Module
atf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
atf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
atf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ach5_25270 (sdhB)
00650 Butanoate metabolism
Ach5_25270 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
Ach5_25270 (sdhB)
00720 Other carbon fixation pathways
Ach5_25270 (sdhB)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Ach5_25270 (sdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Fer4_9
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
AKC08302
UniProt:
A0A1B9TMH9
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All DBs
Position
circular:complement(2619957..2620736)
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AA seq
259 aa
AA seq
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MVELALPKNSQISEGKVWPKPDGAKNVREYRIYRWNPDDGQNPRIDTYYIDIDDCGPMVL
DALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMEEIKGTVKVYPLPHMP
VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRLKLDGLYECILCACCSTSC
PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDDLEDPFRLYRCHTIMNCAQACPKG
LNPAKAIAEIKKMMVERRV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggttgaactcgctctccccaagaattcccagatcagcgaaggcaaagtctggccgaag
ccggatggtgccaagaacgttcgcgaataccggatctatcgctggaacccggatgatggc
cagaacccgcgcatcgatacctattatatcgatatcgacgattgcgggccgatggttctc
gatgcgctgctgtacatcaagaacaatatcgacccgacgctgacgctgcgccgctcctgc
cgtgaaggcatttgcggttcctgcgctatgaacatcgacggcaccaacacgctcgcctgc
accaagggcatggaagagatcaagggaacggtgaaggtctatccgctgccgcatatgcca
gtggtgaaggacctcgttccggacctgtcgaacttctacgcgcagcaccgctccatcgag
ccgtggctgaagacggtttcgccgacgcctgccaaggaatggaagcagagccatgaggac
cgcctgaagctcgacggtctctacgagtgcattctgtgcgcctgctgctccacttcctgt
cccagctactggtggaacggcgaccgttacctcggccccgccgttctgctgcaagcctat
cgctggctgatcgacagccgcgacgaagcaaccggcgaacgtcttgatgatctcgaagat
ccgttccgtctttatcgctgccacaccatcatgaactgcgcgcaggcttgcccgaagggt
ctcaacccggccaaggcgatcgcggaaatcaagaagatgatggtcgagcgtcgcgtctga
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