Agrobacterium tumefaciens Ach5: Ach5_27150
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Entry
Ach5_27150 CDS
T03816
Symbol
thdF
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atf03016
]
Ach5_27150 (thdF)
Transfer RNA biogenesis [BR:
atf03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Ach5_27150 (thdF)
Prokaryotic type
Methyltransferases
Ach5_27150 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
ABC_tran
RsgA_GTPase
AAA_29
Roc
AIG1
AAA_28
Ras
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AKC08490
LinkDB
All DBs
Position
circular:complement(2829238..2830566)
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AA seq
442 aa
AA seq
DB search
MPASADTIYALSSGALPAGVAIIRISGPGAFEAFVTLTGRDLPAPRQAVLCSIRNRNNEI
IDQALMIVFPAPNSFTGENCIEIHSHGSRAVVASIFAELELLEGFRPADAGEFSRRAFEN
GKMDLLEIEGLADLLQAETEMQRRLAVEQSTGKLSALYDGWAGRLTRARALIEAELDFAD
EEDVPDSVAAQVWDAMMQLHSEINSHLKNGGSSEIIRDGFKVALVGEPNAGKSTLLNALS
GRDVAIVTDIAGTTRDVLSVDINLDGYLVRIFDTAGIRETQDVVEKEGVRRAVLTAETAD
LILILQDNDSTPKQSIISLENARHLHLRTKTAISSSTIDAVFDLAISAREGVGLDELRLL
IKREIESRVGVAQTLVPARARHKKRLEETLNYVSDALNSETMDLAIRSEYLRLATTSLGR
ITGRVDVEDLLGVIFSEFCIGK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttccgccgataccatttatgcgctctccagtggagcattgccggccggcgtc
gcaattatcaggatcagtgggcccggcgctttcgaagcctttgtcacgttgaccggtcgt
gaccttcccgcaccgcggcaggcggttctatgttcgattcgaaaccgaaacaatgagatc
atcgaccaggcgctgatgattgttttccctgcaccaaattccttcacgggtgagaactgc
atcgaaatccacagccacggaagccgcgcggttgtcgcatcaatttttgccgagctcgaa
ctgctcgaaggatttcggccggcggatgccggcgagttctcccgccgagcgtttgaaaac
ggcaagatggatcttctcgagatcgaaggtctggcggatctgctgcaggctgaaacggag
atgcagcggcgtctggcggttgagcagagcactggtaagctgtcagcgctctacgatggc
tgggcaggccggttgacgcgtgctcgcgccctgatcgaggcggagctggatttcgccgac
gaggaagatgtgccggattcagttgccgcgcaggtgtgggacgcgatgatgcaacttcat
agtgaaatcaacagccatctcaagaacggcggaagcagtgagataattcgtgacgggttc
aaggtggcgctggtgggagagcctaacgctggcaagtccacgcttcttaatgctctgagc
ggccgtgacgttgctattgtcactgacattgctggtacgaccagagacgtgctgagcgtt
gatattaatctcgatggttacctggtccgcatattcgatacggccggaattcgggagacg
caggatgtggtcgaaaaggaaggtgtaaggcgggccgttctgacagcggaaaccgcggat
cttattttgatattgcaagataacgattcgactccgaaacaatcgatcatttcgctggaa
aatgctcgccatttgcatctacggacaaaaaccgcgatttcctcttctacaattgacgct
gtttttgatctcgccatctccgccagggaaggcgttggtctcgacgaattgcgtttattg
atcaagcgagagattgaaagcagggttggtgttgcgcagacattggtccctgcccgcgcc
cggcacaaaaaacgacttgaagagacgctgaactatgttagtgatgcgctcaattccgag
accatggaccttgcgataaggtcggaatatttgagactcgcaacaacatcgcttggacgc
attactggccgcgtcgatgtggaagatttgctgggcgtgatcttctcggaattctgcata
ggaaaatga
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