Agrobacterium tumefaciens Ach5: Ach5_27250
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Entry
Ach5_27250 CDS
T03816
Name
(GenBank) DNA glycosylase
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_27250
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Ach5_27250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AKC08500
LinkDB
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Position
linear:complement(6229..6705)
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AA seq
158 aa
AA seq
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MTDVVSPEKRSQMMAGIKGKNTKPEIAIRKALFALGLRYRIHDKRLPGKPDLVFSGRKAV
IFIEGCFWHQHDCHLFKMPSSRQDFWQAKIEGNRQRDVRVRSELQALGWRHLTVWECALK
GKTRLPFPAVVDRIRAWLESTESTGEIEGIRDGDSRPE
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgtcgtttcgcccgagaagcgcagccagatgatggctggcatcaagggcaag
aacacgaagccggagatcgccatccggaaagccttgttcgcgctcggcctgcggtatcgc
atccacgacaaacggctgcccggaaagcctgaccttgttttttccggacgaaaggctgtc
atcttcatcgaggggtgcttctggcaccagcacgactgccacctcttcaagatgccatcg
tccaggcaggacttctggcaagcgaagatcgagggcaacaggcagcgtgacgtccgcgtt
cgcagcgaactgcaagctttagggtggcgacatctaacggtgtgggaatgcgccttaaaa
gggaaaacgagattgccatttcccgcggtcgtggacaggatccgagcgtggctcgaatca
accgagtcgacgggggaaatcgaggggatacgggatggcgatagccgacctgagtga
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