Agrobacterium tumefaciens Ach5: Ach5_29310
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Entry
Ach5_29310 CDS
T03816
Symbol
acoR
Name
(GenBank) transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atf03000
]
Ach5_29310 (acoR)
Transcription factors [BR:
atf03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ach5_29310 (acoR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_5
HTH_30
HTH_24
HTH_AsnC-type
AAA
HTH_23
Mg_chelatase
HTH_38
HTH_IclR
HTH_11
HTH_29
AAA_2
AAA_16
HTH_Tnp_ISL3
Zeta_toxin
MarR_2
HTH_28
IclR_C
HTH_psq
HVO_A0261_N
TIP49
Motif
Other DBs
NCBI-ProteinID:
AKC08704
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Position
linear:complement(240385..242259)
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AA seq
624 aa
AA seq
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MVSTLSHIREIERVGMGAVSPRDTPVIQSWLRCLNDYKLDPTIAQEAYIVPELKLREHRE
QAEELIRIGRSGLEALFNQIAEQNYVLLLSDARGVTVDFMGDPTFDNQLRRAGLYLGSEW
SENRAGTCAVGACLVSGEPVIIHQDDHFDTSHIGLTCTAAPVFDTLGDLTAVLDISQLRS
PTAKASQQLALHLVASTARRIELANLMTRTRNDWVLRLARSPEFLDVDPDAAIALDGSGR
ITGMTHGGFGALARSMNMHGLATRDFLGQPISSVFDIDVDDLPRFMRGRPNGERLLRARN
GLVLFASAIAPAVSIRAPVTPEPRLPRALRDMSNGDPAMEKVQARAAKLAARDIPILIQG
ETGSGKEYLARAIHDSCNSDGNFVAVNCAAIPEHLIESELFGYTPGAFTGASQKGKRGLI
EEASGGTLFLDEIGDMPLSLQSRLLRVLSENEVQPVGALKAKPVRLRVLSASHRDLVELV
KEGRFRQDLYYRLNAATVTLPALREREDLGWLIDQFLRRIEKENGETYRIDKAARAILLD
HDWPGNLRELFNALRVAAALSDGGKIDPGCLPEHLFAEVATDDALRDDDDLRRALKDCGN
NVSALARSLGVNRSTIHRRLKRLN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgacgctgtcgcatatacgggagatcgaacgtgtcggcatgggcgcggtcagc
ccgcgtgatacgccggtcatccagtcctggctgcgctgcctcaatgactacaagctcgac
ccaacgattgcgcaggaagcctatatcgtgcccgagctgaagcttcgggagcatcgcgag
caggccgaggagctcatccgtatcggccgctccggtctcgaagccctgttcaaccagatt
gccgagcagaattacgtcctgctgctgtcggatgcgcgcggcgttaccgtcgatttcatg
ggcgacccgaccttcgacaaccagttgcggagggcggggctttaccttggctcggaatgg
tcggaaaaccgggccggcacctgcgctgttggcgcctgcctcgtttccggcgagccggtg
atcatccatcaggatgaccatttcgataccagccatatcgggctgacctgcactgcggcg
cccgtcttcgatacgctcggcgatctcaccgccgtgctcgacatttcccagttgcgctcg
ccgacggccaaggccagccagcaactggcgctgcatctcgttgcctccaccgcgcggcgc
atcgagcttgccaatctcatgacccgcacccgcaatgactgggtgttgcgtcttgcccgt
tcacctgagtttcttgacgtcgatcccgatgcggcgatcgcccttgatggcagcggacgt
atcaccggcatgacccatggtggcttcggggcgctggcgcgctccatgaacatgcacggc
cttgccacccgcgattttctcggccagccgatttcctcggtcttcgatatcgatgtggac
gacctgccgcgcttcatgcgcgggcggccgaatggcgagcggcttttgcgcgcccgcaac
ggtctggtgctttttgccagcgcgatcgcgcccgccgtcagcattcgcgctcctgtcacg
ccagagccacgcttgccgcgagcgctgagggacatgagcaacggcgatccggcgatggaa
aaggtgcaggcgcgggcagcaaagcttgccgcccgcgatattcccatcctcattcagggt
gagacgggcagcggcaaggaatatctggcacgggcgatccatgacagctgcaacagcgac
ggtaatttcgtcgccgtcaattgtgcggcaatcccggagcatctgatcgaatccgaattg
ttcggctatacgccaggtgccttcaccggcgccagccagaaaggcaagcgcggtctcatc
gaggaggcaagtggcggcactttgttcctggatgagattggcgacatgccgctttctctt
caaagccgcctgctgcgcgtgctttcggaaaacgaggtgcagccggttggcgcattgaaa
gccaagccggtgcgtctgagagtactgtccgcatcgcaccgcgatcttgtcgaactggtg
aaggaaggccgtttccggcaggacctctattatcgcctgaacgccgcaacggtgacgctg
ccggcgctgcgggagcgcgaggatctcggctggctgatcgatcagtttctccgccgcatc
gagaaggaaaacggcgagacctacaggatcgataaggcggcacgggcaattctgcttgac
catgactggccgggcaatctgcgcgaactcttcaatgcattgcgggttgcagccgcgctt
tccgatggcggcaagatcgatccgggttgcctgcctgaacacctttttgccgaagtcgcc
accgatgatgcattgcgcgatgacgacgatctgcgccgggcgctgaaggactgcggcaac
aacgtctcggcgctggcgcgaagcctcggcgtcaaccgctccaccattcaccgccgtctc
aaacgcctgaattga
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