Agrobacterium tumefaciens Ach5: Ach5_29490
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Entry
Ach5_29490 CDS
T03816
Symbol
arfA
Name
(GenBank) alpha-L-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00520
Amino sugar and nucleotide sugar metabolism
atf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Ach5_29490 (arfA)
Enzymes [BR:
atf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
Ach5_29490 (arfA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Glyco_hydro_44
Glyco_hydro_39
P63C
Motif
Other DBs
NCBI-ProteinID:
AKC08722
LinkDB
All DBs
Position
linear:complement(260114..261625)
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AA seq
503 aa
AA seq
DB search
MKARVSVHRDFRIGRIDDRLYSAFIEHMGRAIYGGIYEPGHPQADENGFRKDVLKFVQDL
KIPAIRYPGGNFVSAYRWEDGIGPRDKRPVRLDLAWRSKETNQIGVNEFADWASMAGIEM
MLAVNLGSRGLDDARNFLEYVNFPGGTELSDLRRSHGAEKPHGVKMWCLGNEMDGPWQIG
HKTAVEYGRLANETAKAFKGFDPTIEAIVCGSSNDGMPTYPEWEREVLEECYENVDHISL
HKYFGNNSRDTLNYFGKIEETGRYIQTIAGVIDYVKAKKRAKNDVSICFDEWNVWYHIRE
DDGKRIKSWDWPEAPALLEETYNFEDALFVAGLLNEFIRRSDRVRIACIAQLVNVIAPIR
AEKNGPAWRQTIYYPYQFASLYGRGVALNIAVDCPTYDCNAADDVKYLDVAGVFDEDEGV
VTLFVLNRHLTEPAELNVGLTGFSPVSLSLHLSMAGYDLRIGNGPDQPDRVVPVPGSGIG
VEDGALKGSVPALSYHVLRVKVQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcgggtttcagtccaccgggacttccggattgggcgtatcgacgatcgccta
tattccgccttcatcgaacatatggggcgggcgatctatggcgggatttacgagcccggc
catccgcaggcggatgaaaacggctttcgcaaggatgtgctgaaattcgtgcaggatctg
aaaattccggcgatccgctatcccggcggcaacttcgtttcggcctatcgctgggaagac
ggcatcggcccccgtgacaaacggcccgtgcggcttgatcttgcgtggcgctccaaggaa
accaaccagatcggcgtcaacgagttcgcagactgggcgtcgatggcaggcatcgagatg
atgctcgccgtcaacctcggttcccgtggtctggatgatgcccgcaactttctcgaatac
gtgaattttcccggcggcaccgagcttagcgaccttcgccgcagccacggcgccgaaaag
ccgcatggcgtgaagatgtggtgcctcggcaacgagatggacggcccctggcagattggc
cacaagacggcggtggagtatggccggctggccaacgaaaccgcgaaagccttcaagggt
ttcgaccccaccatcgaggcaatcgtctgcggaagttccaacgacggcatgccgacctat
cccgaatgggagcgcgaggtgctggaagaatgctacgagaatgtggaccacatctcactg
cataaatatttcggcaataacagccgcgacacgctgaattacttcggcaagatcgaagaa
acagggcgttatattcagactatcgccggtgtcatcgattacgtgaaagccaagaagcgc
gccaagaacgatgtctccatctgcttcgacgagtggaatgtttggtaccatatccgcgaa
gacgacggtaaacgcatcaagagctgggactggccggaagcgcctgcacttctggaggag
acctacaatttcgaggatgctctcttcgtggccgggttgctcaacgagttcatccgtcgc
tcggacagggtgcgcatcgcctgcattgcccagctcgtcaatgtcatcgcccccatccgc
gctgaaaagaacggaccggcatggcgccagaccatctattatccctatcagttcgcctcg
ctttatggtcgcggcgttgcactgaacattgccgtcgattgcccgacctacgactgcaac
gcggccgatgacgtcaaatatctcgatgtcgccggcgtgtttgatgaggacgagggcgtg
gtaacgctgtttgtcctcaatcgtcatctgaccgaaccagcagagctcaatgtcggtctc
accggcttttcgcctgtgtcacttagcctgcatctttccatggcgggatatgatctgagg
atcggcaacggtccggatcaacctgaccgcgtcgtgccggtgccgggcagcggcattggt
gtcgaggatggggcgctcaaaggctccgtgccggcgctgtcctatcatgttctgcgcgtg
aaggttcagtga
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