Agrobacterium tumefaciens Ach5: Ach5_29850
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Entry
Ach5_29850 CDS
T03816
Symbol
togB
Name
(GenBank) oligogalacturonide transport system substrate-binding protein
KO
K10192
oligogalacturonide transport system substrate-binding protein
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ach5_29850 (togB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atf02000
]
Ach5_29850 (togB)
Transporters [BR:
atf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Oligogalacturonide transporter
Ach5_29850 (togB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AKC08758
LinkDB
All DBs
Position
linear:complement(293729..295003)
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AA seq
424 aa
AA seq
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MKMTTMTRTMAMLAGAAYLATVAAPAAGAAELRMSWWGGESRHVATQKAIAACGEKYSHT
VKGEFTGFDGYLEKLTTQMAGKTEADIVQVNWPWMPLFSKNGEGFADLRQLKPLDLSQWA
ETDLEAGSMNGVLQGLSVSTTGRVFFFNATTFEKAGVEIPKTWDEFFAATKTIKEKLGKD
HYTFNAVKETAQLLVTLAVVQKTGNDLVDPKTNRVAWTPEELAEGISFVGKLVETGSIRS
QKEEAADGNVNLYEKPSWSEGRIAGSYEWDSTYSKYADPLKDGQVLKPVPMLKLADAVTE
GVYRKPSMVFSISKNSKNPEAAAQILNCLLNEPEGIDALGTSRGLPASKAAAQRLGDKGE
PEVRAANAIVMAASGPVVSPFNEHPEIRSGFIDTLEEYAYGQLTAEEAAEQIIDTTNDVL
AKFD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgacgacgatgacgagaacaatggcgatgctggccggcgctgcctatctggcc
acggtggctgcgcctgcggcgggtgccgcggaactgcgtatgtcgtggtggggcggcgaa
agccgtcatgtcgccactcagaaggcgattgccgcctgcggtgaaaaatacagccacacg
gtcaaaggtgaatttaccggcttcgatggatatctggaaaaactgaccacgcaaatggca
ggcaagacggaggctgatatcgttcaggtgaactggccatggatgccgctgttttccaag
aatggtgaaggttttgctgatctgcgtcagctgaaacctctcgatctttcgcaatgggcc
gagacggatctggaagcgggttctatgaacggggtgcttcagggcctttcagtctccacc
accggccgcgtgttttttttcaacgccaccaccttcgagaaggctggcgttgaaatcccc
aagacatgggatgaattcttcgcggcaacaaaaaccatcaaggaaaagctcggcaaggat
cattacaccttcaatgccgtaaaggagactgcccagcttctcgtgacactcgccgtggtg
cagaaaaccggaaacgatctggtcgaccccaagaccaaccgtgtcgcctggacgccggag
gaactggcggaaggtatctcgttcgtcggcaagctggtggaaaccggctccattcgctcc
cagaaagaggaagcggccgatggcaacgtcaatctttatgaaaagccgtcgtggtccgaa
ggccgtatcgctggttcctatgaatgggattccacctattcgaaatatgccgatcccctg
aaggatgggcaggtgctgaaacccgtgccgatgctgaagcttgccgatgccgtaacggaa
ggcgtttatcgcaagccttccatggtcttttctatctcgaaaaactcgaagaaccctgaa
gcggcagcgcaaatcctgaactgcctgctgaacgagcctgagggcatcgatgcgcttggc
acgtctcgcggcctgcctgcttccaaggctgcggcgcagcgtctgggcgacaagggtgag
ccggaagtgcgcgccgccaacgccatcgtcatggcggcatctggaccggtagtttcgccc
ttcaacgaacatccggaaatccgctccggcttcatcgatacgctggaggaatatgcctat
ggccagctgacggcggaagaggcggctgagcagatcatcgataccaccaatgacgttctg
gccaaattcgattga
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