Agrobacterium tumefaciens Ach5: Ach5_31260
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Entry
Ach5_31260 CDS
T03816
Name
(GenBank) autotransporter
Organism
atf
Agrobacterium tumefaciens Ach5
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
AKC08899
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All DBs
Position
linear:complement(453692..457660)
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AA seq
1322 aa
AA seq
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MSACFCHVSEGETCPTAEMRALTPSRLFVCGTAGLFFFIFSLAATSEAIAETLLWTGSDG
GDWFTDADWGPSRRVPGASDDVMIDTYGPVITIGTSAKARELLIGTAPGAGTLVVQGGLQ
TDSVFLGAVSGASGTASFIGAKWQNDGDVSIGGSGVGNLSLLHGTTASSKNVLIGGSGTG
NGSLKLDNSSTLTTSDTVFVSGSSSGAGGGGNLEVLGASELYSARGVLAEDLGTTGTALV
SGEDSHWTMSGDMVVGEAGVGKLTVTGGGTVISQTTTVIANLASADGSSVTVSRLGSALQ
SGGSLVVGNSGAATLLVEAAGTVTSGEAIIGRHSVSEATVTGDGSNWRTGNLQIGGDTAD
LGGAAGNGKLNVLAGGSVDSTTARLGVVAGATGAAAVDGQGSVWTVNRGDLEVGVNGTGS
LAVTGGGLVDAANIIIGTNAGGTGSARVSGAGSKLQSRADLNVGLDGNGSMTVEAGGTVQ
SRDGYVASHGGSTSTVTVAGDGSSWAMTGTFFVGYGGGTTGNMSVSAGGGIKAAKVMLGD
LGGSSGTMTITGAGSNVTAYIDNGVVNSGSVDVGFEGSGSLTVTNGGSLDAYDLYAGSAA
GSNGNVLVSGVGSRVAVGNLMVVGDAGNGSVEITGGASLAAPTILIAASAGSTGVLNIGA
AAGQTARSAGALEARTIAFGAGNGSIVFNHSETGYILSADISGAGKVVAEAGVTTLGGNN
SYYGGTTISSGTLKGTSKSFGSGGIANDAQLVVDGAGTLSNAISGTGTFEKTGDGNLVLT
GNSTYTGTTAVSSGKLSVNGSVASAVSVGTGATLGGSGTIGGLTVGSGGTLAPGNSIGTL
ASTGSATFASGSRYEVEIDAAGNSDRLAVTGTITIDNDVSLVVTSLANQTAYSLSTRYTI
LTATGGITGTFSNVGENFAYLTARVARSADDGSTYLSFARASPDAGFLAAETSTANARGA
ANAIEALGESSPLYEAAVFLQQGETQSAFAQLAGEIHPSLAMALINRSQLTRDVILNRLR
SAFEGVDARPILPVAYAEGGSNPFDIDEGSLTFWSSGFGSRGRIDGDGNGASADMKGGGV
LFGIDGDLADGWRAGVAAGYGRDVISQGSPAASADVDSYYVAGYAGKTIGPASLRLGATH
AFQDVETRRAVSFSTLKEDLTAGYDASTTQVFAEAAWRFDFDLTHIEPYANIAYVNTRTD
AFREMGGIAAVSSGAVSHDEFYSTLGARISRDIALEGMLGRAMLDIGWRHAYGDPMMESA
LFYDGGSAFSVTSAAMARDVALINLGLSYNLNPSATLTFRYGAVFGAGLLDQSASAQLGV
RF
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttgtttctgccatgtttcggaaggggaaacctgtccgacagcggaaatgcgt
gccttgacgccaagcaggcttttcgtctgcgggacggcgggtctttttttctttatattt
tcgcttgccgctacatcggaggctatcgccgaaacgttgctctggacggggtccgatggg
ggtgactggtttaccgacgcggactggggtccgtcgcgccgcgtgcctggtgccagcgat
gatgtgatgatcgatacctacgggccggtcattacgatagggacgagcgccaaagcccgt
gaattgttgataggcaccgcgccaggggccggcacgctggtagtgcagggcggcttgcag
acagattcagtttttctcggcgctgtcagtggcgcgtccggcacggcaagtttcatcggt
gcgaaatggcagaatgacggtgatgtctccatcggtggcagcggcgtgggtaacctttcc
cttttgcacggcacgacggcatcgtcgaagaacgtccttattggcggaagcgggactgga
aatggctccctcaagctcgataactcttccactctcacgacttccgacaccgtttttgtg
agcgggtcgtcttccggagctggcggcggtggaaatctggaggtgctcggcgccagcgag
ctttacagcgcgagaggcgttctggccgaagacctcggcacgacgggaaccgcgctggtt
tccggtgaagacagccactggaccatgtccggggatatggtcgttggcgaagcaggcgtt
ggtaagctcaccgtaaccggtggcggcacggtcatcagtcagacaacgacggtgattgca
aatctggcttctgcggacggaagttccgtgacggtaagccgtctgggctccgcgctgcaa
agcggcggatcgctcgtcgttggcaattctggagctgcaacgcttctcgtagaggccgca
gggaccgtaaccagtggcgaggccattatcggtcgccactcggtgagtgaggcgaccgtg
accggcgacggctccaactggaggaccggcaatctgcagatcggcggcgacaccgccgat
ctgggcggtgccgctggcaacggcaagctcaacgtcctggcaggtggctccgttgatagt
acgacggcgcggcttggcgttgtggcgggtgcaacgggcgctgccgccgtggatgggcag
ggctcggtctggacagtcaaccgtggcgatctcgaggtgggggtaaatggcacgggttcg
ctggcggtcacgggcggcggccttgtcgatgcagcgaatatcatcatcggaacaaatgcc
ggtggtactggttccgcccgggtatccggcgcaggcagcaaattgcaaagccgcgccgat
ctcaatgtcggccttgacggcaacggttccatgaccgtcgaggccggtggcacggtgcaa
agccgcgacggctatgttgcgtcccatggcggttccacttccaccgtaacggtggcgggc
gacggatcgagctgggcgatgaccggaacgttttttgtcggatacggaggcgggactaca
ggaaatatgtcggtcagcgccggcggcggtatcaaagctgccaaggtgatgctaggtgat
cttggcggttcctccggcacgatgacgatcacaggagcgggttcgaacgtcaccgcttat
atcgacaacggcgttgtgaactccggctccgtcgatgtgggttttgaaggttccggaagc
ttgaccgttacgaatggcggatcgcttgatgcctatgatctctatgcgggcagtgcggcg
ggatcgaatggaaacgttctggtcagcggtgtgggatcgcgcgttgcggttggcaatctc
atggtcgttggcgatgccggaaacggttccgtggagataaccggcggagcctcgctggct
gcgcccactattctcattgccgcatcggcgggttccacaggcgtgctcaacatcggagct
gccgcgggccaaaccgcccgctcagccggtgcgttggaagcgcgcacgattgctttcggt
gcaggcaacggcagcatcgtcttcaaccattccgagaccggctatatactctcagccgat
atttcaggtgcgggcaaagtcgttgccgaagctggcgtcacaacgcttggcggcaataac
agctattacggcggcaccacgatttcctccggcacgctgaaaggcacctcaaaaagtttc
ggctcgggcggcatcgccaatgatgcgcaactcgttgtcgatggtgccggcacgctttcc
aatgccatcagcggtactggcacctttgaaaagaccggcgatggtaatctggtcttgacc
ggaaatagtacctatacgggcaccactgcggtttcctctggaaagctcagcgtcaatggt
tcggttgcaagcgctgtttcggtcggtaccggtgccacactcggcggctccggcaccatc
ggcggcctgaccgtcggctcgggtggcacgctcgcgcccggcaattcgatcggcacgctg
gcttccacgggcagcgcaacatttgctagtggctctcgctatgaggttgaaatcgacgcc
gccggcaattccgacaggcttgccgtgaccggaactatcaccatcgacaatgatgtcagt
cttgtcgttacgtcgctggcgaaccaaactgcctatagcctcagcacccgctacacgatc
ctgacggcaacgggcggaattaccggtacgttttcaaatgtcggcgaaaatttcgcctat
ctgaccgcaagggtagcccggagtgccgacgacggcagcacctatctttccttcgcccgg
gcatcaccggatgccggctttttggccgctgaaacatcgacggccaatgcgcgcggggcc
gccaacgccatagaggcgcttggggaaagctcgccgctctacgaggcggccgtgtttctg
cagcagggcgaaacccaatccgccttcgcgcagcttgccggggaaattcatccctcgctt
gccatggctttgatcaaccgcagccaactcacccgcgatgtcattctcaaccggctgcgc
agtgctttcgaaggtgtcgatgcgcgcccgatcctgccggtcgcctatgctgaaggcgga
tcaaacccgtttgacattgacgagggttcactcacgttctggtccagtggtttcggctct
cgcggccgcatcgatggcgatggaaacggcgcatcggccgacatgaagggcggcggcgtc
ctctttggtattgacggagatttggctgatggctggcgtgccggggtggccgccggatac
ggccgcgatgtgatcagccagggttctcctgcggcatctgctgacgtggacagctactat
gtggcgggttatgcgggcaaaacaattggccctgcatccctgcgtcttggtgcaacccac
gcctttcaggatgtcgaaacgcgccgggcggtttccttttcaacattgaaggaggaccta
accgctggttacgacgcttccaccacgcaggtctttgccgaagccgcctggcggttcgat
ttcgatctcacccatatcgagccttacgccaatatcgcttacgtgaatacgcggacggat
gctttccgggagatgggcggtatcgccgccgtctcttcgggtgccgtcagccacgacgag
ttttattcgacgctcggggcgcgcatcagccgtgacattgcgttggaggggatgcttgga
cgcgcgatgctcgatatcgggtggcgtcatgcctatggcgatccgatgatggagagtgca
ctgttctacgatggtggcagtgcgttttctgtgacaagtgctgccatggcgcgcgacgtg
gcattgatcaatctggggcttagctacaatctcaacccatccgccaccttgacattccgt
tacggcgcggtttttggcgcgggtcttctggatcaatctgcttcagcccaacttggagtt
cgtttctga
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