Agrobacterium tumefaciens Ach5: Ach5_34770
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Entry
Ach5_34770 CDS
T03816
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atf03036
]
Ach5_34770 (xerD)
Chromosome and associated proteins [BR:
atf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Ach5_34770 (xerD)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AKC09250
UniProt:
A0AA86FZH1
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All DBs
Position
linear:843871..844866
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AA seq
331 aa
AA seq
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MSSKEMSGRDGARLESFLEMMSAERGAAANTLSSYERDLSDLREFLGGRGQSLMEAATAD
LSAYLTHLSTQGFAATSQARRLSSMRQFYRFLYSEGLRGDDPTGTIDAPKKGLTLPKTMS
VADVTKLLGIAAEEAALTGPGQLARIRMHLLLELLYATGMRVSELVSLPVKVLRQEGRFL
MIRGKGNKDRMVLLSRAAIEAMEKYDAARKSLVPEKSRTPASPKKADSPESPWLFPSNSK
EGHLPRQVFARDLKDIAIRAGLNPSAVSPHVLRHAFASHLLQNGADLRAVQELLGHSDIS
TTQIYTHVLEERLQELVQTHHPLAKQGKNLD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaaagagatgagcgggcgggacggcgcgcggctcgaaagttttctggaaatg
atgagcgccgaacggggtgccgccgccaatacgctctcttcttacgaacgcgacctttcc
gatctgcgtgaatttctcggtggccgaggccagtccttgatggaagccgccacggcagac
ctgtcggcctatctgacccatctttccactcagggctttgcagccacgtcgcaggcaaga
cgcctgtcttccatgcggcaattctaccggttcctctattctgaaggacttcgcggcgac
gacccgaccggtaccatcgatgcacccaagaagggcctcaccttgcccaagacgatgagc
gtcgcggacgtgacaaaacttcttggcatcgctgctgaagaggccgccttaaccggcccc
ggccagcttgcccgcatccgcatgcatctcctgctcgaacttctctacgcgaccggcatg
cgcgtcagcgaactcgtttcgctgccggtcaaggttttgcgccaggagggacgcttcctg
atgatccgcggcaagggcaacaaggaccgcatggtgttgctgtctcgcgcggccatcgag
gcgatggaaaaatacgacgcggccaggaagtcgctcgtacctgagaaaagcaggacgccc
gcgtcccccaaaaaggctgacagtccggaaagtccgtggctgtttccttcaaacagcaag
gaagggcatctgccgcgacaggttttcgcccgcgacctgaaggacattgccattcgcgcg
ggcctcaatccctcggcggtgtcaccgcatgtcctgcgccacgcctttgccagccacctt
ctgcagaacggcgccgacctgcgcgccgtgcaggaattgctcggccattccgacatttcc
acgacacaaatctatacacatgtgctggaagaacgcctgcaagagctggtacaaacacat
cacccccttgccaaacagggcaaaaaccttgattag
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