Agrobacterium tumefaciens Ach5: Ach5_40300
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Entry
Ach5_40300 CDS
T03816
Symbol
acnB
Name
(GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00020
Citrate cycle (TCA cycle)
atf00630
Glyoxylate and dicarboxylate metabolism
atf00640
Propanoate metabolism
atf00720
Other carbon fixation pathways
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
atf01200
Carbon metabolism
atf01210
2-Oxocarboxylic acid metabolism
atf01230
Biosynthesis of amino acids
Module
atf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
atf_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
atf_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ach5_40300 (acnB)
00630 Glyoxylate and dicarboxylate metabolism
Ach5_40300 (acnB)
00640 Propanoate metabolism
Ach5_40300 (acnB)
09102 Energy metabolism
00720 Other carbon fixation pathways
Ach5_40300 (acnB)
Enzymes [BR:
atf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
Ach5_40300 (acnB)
4.2.1.99 2-methylisocitrate dehydratase
Ach5_40300 (acnB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase
Aconitase_B_N
Motif
Other DBs
NCBI-ProteinID:
AKC09803
LinkDB
All DBs
Position
linear:1470979..1473768
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AA seq
929 aa
AA seq
DB search
MNLYLDYLAEIESRKTQGLAPKPIDDGGLTGEIIALIRDTGSEYRADALKFFIYNTLPGT
TSAAGVKAAFLKQIILGETVVPEITPTFALELLSHMKGGPSIEALLDIALGDDAGLAQQA
GEVLKTQVFLYDADMFRLRDAFKAGNTVAKGVLESYAKAEFFTKLPDVEDEIKVVTFIAA
EGDISTDLLSPGNQAHSRSDRQLHGQCMITPEAQAEIVALQKQHPDKRVMMIAEKGTMGV
GSSRMSGVNNVALWTGKQASPYVPFVNFAPIVAGTNGISPIFATTVDVTGGIGINLKNWV
KKLGEDGKPILNNDGNPVLEQKYSVETGTVLKIDAKNYKLRDENGTELVDLSSSFTPQKM
EFMKAGSSYAIVFGKKLQTFAAETLGVEATPVFAPNKEISIEGQGLTAVEKIFNRNAVGV
TPGKVLHAGSDVRVKVNIVGSQDTTGLMTAQELEAMAATVISPLVDGAYQSGCHTASVWD
KKAQANIPKLMSFMNNFGVITARDPKGVYHSMTDVIHKVLNDITVDDWAIIIGGDSHTRM
SKGVAFGADSGTVALALATGEATMPIPQSVKVTFKGKMQPHMDFRDVVHATQAQMLKQHG
DNVFQGRIIEVHIGTLLADQAFTFTDWTAEMKAKASICISEDETLIESLEIAKSRIQIMI
DKGMDNAAQTLKGLIAKADQRIAEIRSGEKPALAPDDNAKYFAEVVVDLDVIDEPMIADP
DVNNTDVSRRYTHDTIRPVSYYGGTKKVDLGFVGSCMVHKGDIKIVAQMLKNIEKAEGKV
EFKAPLVVAAPTYNIIDELKAEGDWEILQKYSGFEFDDLKPKTANRTEYENILYLERPGC
NLCMGNQEKAEKGDTVLATSTRLFQGRVVEDTAEKKGESLLASTPVVVLSAILGRTPSAE
EYKAAVVGIDLTKFAPPKAAPIDSLSVQY
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttacttggattacctggctgagatcgaaagcagaaaaactcaagggctcgct
cccaagccgatcgacgatggcggattaaccggcgaaatcattgccttgatcagggatacc
ggtagcgaatatcgcgcggatgccctcaaattcttcatttacaacaccttgccaggcacc
acgagcgctgccggcgtcaaggccgcctttctgaagcagatcattctgggcgaaactgtc
gttccggagatcacgcccactttcgccctcgaactgctgtcgcatatgaagggtggcccc
tccatcgaagcgctgctcgacatcgcccttggtgatgatgccgggcttgcccagcaggca
ggcgaagtgctgaagacgcaggtcttcctctatgacgctgacatgttccggctacgtgat
gccttcaaggcgggcaataccgtcgcgaagggcgttcttgagagctatgccaaggctgag
ttcttcaccaagcttcccgatgtcgaggatgagatcaaggtcgtgaccttcatcgccgcc
gaaggcgatatttcgaccgatcttctgtcccctggcaaccaggcgcattcgcgctccgac
cggcagctgcacggccagtgtatgatcacgccggaagcgcaggcggaaatcgtcgcgctg
cagaagcagcatcccgacaagcgggtgatgatgatcgccgaaaagggcacgatgggcgtc
ggctcgtcgcgcatgtcgggcgtcaacaacgtggcgctgtggaccggcaagcaggccagc
ccctatgtgcccttcgtcaacttcgccccgatcgttgctggcaccaacggcatttcgccg
atcttcgccaccactgtcgatgtgacgggcggcatcggcatcaacctgaagaactgggtg
aagaaactcggcgaagacggcaagcctatcctcaacaatgacggcaatccggttctggag
cagaaatattcggttgagaccggcaccgttttgaagatcgacgccaagaactacaagctt
cgtgacgagaacggcacggaactggtcgatctctcatcctccttcacaccgcagaagatg
gaattcatgaaggcaggcagctcctatgccatcgtcttcggcaagaagctccagacgttt
gcggctgaaacgcttggcgtcgaggccaccccggtctttgcgcccaacaaggaaatttca
atcgaaggccagggcctcacggccgtcgagaaaatcttcaaccgcaatgccgttggcgtc
acgcccggcaaggtgctgcatgccggctccgacgtgcgcgtgaaggtcaacatcgtcggc
tcgcaggacacgaccggtctgatgacggcgcaggaacttgaggcgatggcggcgaccgtc
atttcgccgctggtggatggtgcgtaccagtcgggttgccacacggcctccgtctgggac
aagaaggcgcaggcgaacattccgaagctcatgtccttcatgaacaacttcggcgtcatc
actgcccgcgaccccaagggcgtctatcattcgatgacggacgtgatccacaaggtgctg
aacgacatcaccgtggacgactgggcgatcatcatcggcggcgacagccacacccgcatg
tccaagggcgtggccttcggtgccgactctggcactgtggcgctggcactggcgacgggc
gaggcgaccatgccgatcccgcaatccgtcaaggtcacctttaagggcaagatgcagccg
catatggacttccgcgatgttgtccatgcgacgcaggcgcagatgctgaagcagcatggc
gacaacgttttccagggccgcatcatcgaagtccatatcggcacgctgctcgctgaccag
gccttcacctttaccgactggacggccgagatgaaggccaaggcgtcgatctgtatctct
gaagacgagacgctgatcgagtcgctggaaatcgccaagtcgcgtatccagatcatgatc
gacaagggcatggataatgccgcccagacactgaagggcctgatcgccaaggcagatcag
cgtattgccgaaatccgctcgggcgaaaagcccgctctggcccctgacgacaatgcgaaa
tatttcgctgaagtcgtcgtggatctggacgtgatcgacgaaccgatgatcgccgacccc
gacgtcaacaacaccgatgtctcccggcgctacacccatgacacgatccgtccggtgtcc
tattacggcggcaccaagaaggtcgatctgggcttcgtcggttcgtgcatggtgcataag
ggcgacataaagatcgtcgcccagatgctgaagaacatcgagaaggccgaaggcaaggtc
gagttcaaggcgccgctcgtggtcgcggcaccgacctataacatcatcgacgagctgaag
gcggaaggggattgggaaatcctgcagaagtattccggcttcgagttcgatgatctcaag
ccgaagactgccaaccggacggaatacgagaacatcctctatctggagcgcccgggctgc
aacctttgcatgggcaaccaggagaaggcggagaagggtgatactgttctggcaacctcg
acccgtctcttccagggccgcgttgttgaggacactgccgagaagaagggtgaatcgctg
ctggcctcgacccctgtcgtggtactgtcggcaatccttggccgcacaccgagcgctgag
gaatacaaggccgccgtggtaggtatcgatctgaccaagttcgcaccgccgaaagctgcg
ccaatcgattccctgtctgtccaatactaa
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