Agrobacterium tumefaciens Ach5: Ach5_41170
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Entry
Ach5_41170 CDS
T03816
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00071
Fatty acid degradation
atf00310
Lysine degradation
atf00362
Benzoate degradation
atf00380
Tryptophan metabolism
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
Ach5_41170 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
Ach5_41170 (gcdH)
00380 Tryptophan metabolism
Ach5_41170 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Ach5_41170 (gcdH)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
Ach5_41170 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
AKC09890
UniProt:
A0AB36EMB9
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Position
linear:complement(1579187..1580374)
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AA seq
395 aa
AA seq
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MSERAAFNWQDPFLLEDQLTDDERMIRDAAAAFGKSELMPRVSEAYLSETTEPELFRLMG
RTGLLGVTLPEEYGAANASYVAYGLVAREVERIDSGYRSMMSVQSSLVIHPIFAYGSDEQ
KKKYLPGLVSGELIGCFGLTEPDAGSDPGGMKTRAEKIAGGYRLRGSKMWISNAPIADVF
VVWAKSEAHDNQIRGFVLEKGMKGLSAPKIGGKLSLRASITGEIVMDGVEVGEDALLPNV
SGLKGPFGCLNRARYGISWGVMGAAEDCWFRALQYGLDRKQFGKPLAGMQLYQKKLADMQ
TEIALGLQASLRVGRLMDEHKMAPEMISIIKRNNCGKALDIARQARDMHGGNGIQIEYHV
MRHAQNLETVNTYEGTHDVHALILGRAQTGIQAFF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaacgcgcagcattcaattggcaggacccttttctgctggaagaccaactgacc
gacgacgagcggatgatccgcgacgccgccgcagccttcggcaaatcggaacttatgccg
cgtgtgtccgaggcctatctttctgagaccaccgaaccggaactgttccgcctgatgggc
cgcaccggccttctgggcgtcaccctgccggaagaatatggcgccgcaaatgccagctac
gtggcctatggtctcgtggcccgcgaggtggagcgtatcgacagcggttatcgctcgatg
atgagcgtgcagtcctcgctcgtcatccatccgatcttcgcttatggctcggacgaacag
aagaagaaatacctgcccggcctcgtctccggcgagctgatcggctgtttcggcctgacc
gaaccggatgccggctccgatccgggcggaatgaagacccgcgccgaaaagatcgccggc
gggtatcgcctgcgtggttcgaaaatgtggatttccaatgcgcccatcgccgatgtcttc
gtcgtctgggcgaaatccgaagcccacgacaaccagattcgcggcttcgtgctggaaaaa
ggcatgaagggtctgtctgcaccgaagatcggcggcaagctttcgctgcgcgcctccata
acaggcgagatcgtcatggatggcgtggaagtgggcgaagatgcgctgcttccgaatgtt
tccggcctgaaaggcccgttcggctgcctcaaccgcgcccgctacggcatttcctggggc
gtgatgggcgctgcggaagattgctggttccgcgccctgcaatatggtctcgaccgcaag
cagttcggcaagccgctggccggcatgcagctttaccagaaaaagctcgccgacatgcag
accgagatcgctctcggcctccaggcatcgctgcgcgtcggccgcctgatggacgagcac
aaaatggcgccggaaatgatctccatcatcaagcgcaacaattgcggcaaggcgctggat
atcgcccgccaggcccgcgacatgcacggcggcaacggcatccagatcgagtaccacgtg
atgcgccacgcccagaacctcgaaacggtcaacacctacgagggcacgcacgacgttcac
gcgcttatcctcggccgggcgcagacgggcattcaggcgtttttctaa
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