Agrobacterium tumefaciens Ach5: Ach5_41200
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Entry
Ach5_41200 CDS
T03816
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ach5_41200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atf02000
]
Ach5_41200
Transporters [BR:
atf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Ach5_41200
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
TcdA1_RBD_3
Motif
Other DBs
NCBI-ProteinID:
AKC09893
UniProt:
A0AA86G1M2
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All DBs
Position
linear:1582590..1583612
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AA seq
340 aa
AA seq
DB search
MKKIILASGTALMLTMGAAQAQDKTLTISVYAFAQDEFKELVYTPFEKQCGCKLVVETGN
SVERLAKMEANKANPVVDLAIVSMADALSATRKDLIQKIDAAKVPNIGKLYDIAKDPNGD
GMSVGVNFYATSIVYRTDKMKIDSWADLLKDGIVDHVAFPNVTTNQGPPALYMLGKAIGK
DTPDLSGAIEAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAPIGRFSWAPFTKLDLPLAW
ATPKEGQTGGMNVLVVPKGTKNEDLALQFMDFWLSTDVQKALAEKLVDSPTNKEVKVSDE
VANNITYGDETAKSLQLIPSAVTLDNRDKWLSEWNAKVGQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcattcttgcatcgggcaccgccctgatgctgacgatgggtgccgcgcag
gcgcaggacaagacgctgacgatctcggtctacgccttcgcgcaggacgaattcaaggaa
ctggtctatacaccgttcgaaaagcaatgcggctgcaagctggtcgtcgagaccggcaac
agcgttgagcgcctcgccaagatggaggccaacaaggccaatccggtggtcgatctcgcc
attgtttccatggcggatgcgctttccgccacccgcaaggacctgatccagaagatcgat
gccgccaaggtgccgaatatcggcaagctctatgacatcgccaaggatccgaatggcgac
ggcatgagcgtcggcgtcaatttctacgccacgtcaatcgtttaccgcacagacaagatg
aagatcgatagctgggccgatcttttgaaggacggtatcgtcgaccacgtcgctttcccg
aatgtcaccaccaatcagggcccgccggcgctttacatgctgggcaaggccatcggcaag
gatacgcctgatctctccggcgctatcgaagccgtgggcgaaaagaaggacgatatcgtc
acgttctacgtgaaatcgtcgcagctggtgcagctcatgcagcaggaagaaatctgggcc
gcccccatcggccgcttctcctgggcgccctttaccaagctcgatctgccgcttgcctgg
gcaacccccaaggaaggccagaccggcggcatgaacgtgctcgtggtgccaaagggcacg
aagaacgaagatctggcgctgcagttcatggatttctggctctcgaccgacgttcagaag
gcgctggccgaaaagctcgtggacagcccgaccaacaaggaagtcaaggtgtccgacgag
gtggcgaacaatatcacctatggggacgaaaccgcaaaaagcctgcagctcattccttcc
gccgtaacgctcgacaaccgtgacaagtggctgtcggagtggaacgccaaggtcggccag
taa
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