Agrobacterium tumefaciens Ach5: Ach5_42220
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Entry
Ach5_42220 CDS
T03816
Name
(GenBank) oligopeptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ach5_42220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atf02000
]
Ach5_42220
Transporters [BR:
atf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Ach5_42220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AKC09995
LinkDB
All DBs
Position
linear:complement(1695407..1696942)
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AA seq
511 aa
AA seq
DB search
MTKIKKGMTATFVALALAGTAFTAAPAFAAGKMTISSPQDPGSWDPIDTFLVQWAAVATN
IFDGLTYRGPDLKLVPGLAESWEELDEGKRIRFKLRQNVKFHNGEPFNAAAVKFTFERLL
GEQGAKGPQRSNYVAIESVDVIDDYTVDMKLKAPDPVLLTKLAGYGGMIVPPKYIQEKGE
DNFNLNPVGTGAFKFVSYAPKTNIKLEANPDYWGGAPKLSELEFRFIAEPATAVAELQAG
RVDLVIPPTIPIGMIPVIEGDSKLEIVSVPGPTVDALRFNTRDGITADPKVRKAIIMAVD
RGTIVKSILAGQASEIASFQSALSFGYDADLKPLPYDLEGAKKLLAEAGVKPGAALQIDI
RGNDATMNEVAQVISSYLSMVGITATIKPYETNVLLNDIIPQGKTGAMFQQKWGGWTFDY
DNTAYSMYHSGEKWNPYDKDEKLDKLLESQRPLTDRAEREKILKQVGAYAAERALEIPLY
NTNAIYGINKRVKGFVAPPDNRLKLTDVTVE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatcaaaaaggggatgacggcaacgttcgtcgcgcttgcgctggccggcacg
gccttcaccgcagcgccggctttcgccgctggcaagatgaccatttccagcccgcaggac
cccggcagctgggatccgatcgacaccttcctggtgcaatgggcagctgtcgccaccaac
atcttcgatggcctgacctatcgcggtccggacctgaaactcgtgcccggccttgccgaa
tcctgggaagagcttgatgaaggcaagcgcatccgcttcaagctgcgccagaacgtcaag
ttccataatggcgagcccttcaacgccgccgccgtcaagttcaccttcgagcgccttctc
ggcgaacagggtgccaagggcccgcagcgctccaactatgtcgccatcgaaagcgtcgac
gtcatcgacgactacaccgtcgacatgaagctcaaggcgcccgatccggtgcttctgacc
aagcttgccggttatggcggcatgatcgttccgccgaaatacattcaggaaaagggtgag
gacaactttaacctcaacccggtcggcaccggcgcgttcaaattcgtctcctatgcgccg
aagaccaacatcaagctggaagccaacccggattactggggcggcgcaccgaagctctcc
gaactggaattccgcttcatcgccgagccggcgaccgcagttgccgaattgcaggccggc
cgcgtcgatctcgtcattccgcccaccatcccgatcggcatgatcccggtcatcgaaggc
gattccaagctggagatcgtcagcgttccaggcccgacggtggatgcgctgcgtttcaac
actcgtgacggcatcaccgctgatcccaaggtgcgcaaggccatcatcatggccgttgat
cgcggcacgatcgtcaagtcgatccttgccggtcaggcctcggaaatcgccagcttccag
agcgcgctgtccttcggttacgacgccgatctgaagccgctgccttatgatctggaaggc
gcaaagaagctgctcgcggaagccggcgtcaagccgggtgcggcgctgcagatcgatatc
agaggcaacgatgcgacgatgaacgaagtcgcgcaggtcatctccagctatctgtccatg
gtcggcatcaccgccaccatcaagccctatgagaccaacgtgctcctgaacgacatcatc
ccgcagggcaagaccggcgcgatgttccagcagaagtggggcggctggaccttcgattac
gacaacacggcctattccatgtaccactcgggtgaaaagtggaatccttacgacaaggac
gagaagctggacaagctgctggaatcgcagcgcccactgactgaccgagccgagcgcgaa
aagatcctcaagcaagtcggcgcctatgccgccgagcgcgcgctggaaattccgctttac
aacaccaatgccatttacggcatcaacaagcgggtcaagggtttcgtggcaccgccggat
aaccgcctgaagctgacagacgtcaccgtcgaataa
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