Agrobacterium tumefaciens Ach5: Ach5_43420
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Entry
Ach5_43420 CDS
T03816
Name
(GenBank) DNA helicase
KO
K10979
DNA end-binding protein Ku
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Ach5_43420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_43420
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Ach5_43420
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Ortholog
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AKC10115
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All DBs
Position
linear:1828875..1829705
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AA seq
276 aa
AA seq
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MNRRASWKGHLTFGDFTCEIGLYSALTSSEKISFNIVNRKTGHRVERQYVDSDTGDAVDR
EDQVKGYELDNGDHIVIEGDEIATLMPENDKVIRIRHFLSHDEIDKLYFDKSYYLAPTQE
GGEEALTLLAKAMDDEKVSALGEAVLFRRNRVLLIRPSGKALVATTLNFGYEVRSQTTVF
KSIPDIQFDEEMLELAGHIIGKRAGTFDPAEYTDRYNDALAELVKAKIEGREISKQPPRK
QDNIIDLKEALRRSAGDCDSGKSTAGAGRKSSRKAS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggagggcgagctggaagggtcatctgacattcggcgatttcacatgtgaaatc
ggtctctattccgcgctcacttcatcggaaaagatctccttcaacatcgtcaaccgaaag
accggccatcgcgtcgaacggcaatatgtcgatagcgataccggcgacgctgtcgaccgc
gaggatcaggttaagggatatgaactcgacaatggcgaccatatcgtcatcgagggagat
gagatcgcaacgctgatgccggaaaacgacaaggtcatccgcatcaggcattttctgagc
cacgacgagatcgacaagctctatttcgacaaatcctattatctggcgccgacgcaggaa
ggtggcgaagaggctttgacgctgctggcaaaagccatggacgacgagaaggtctcggca
cttggcgaagcggtactctttcgccgaaaccgcgtgctgttgatccgtccaagcggcaag
gcgctcgtggcgacgaccttgaatttcggctacgaggttcgctcgcaaaccaccgttttc
aagtccattcccgatattcagttcgatgaagagatgcttgaactcgccggtcacatcatc
gggaaacgggcaggcacattcgatcccgcggaatataccgatcgttacaatgatgcgctg
gcggaactggtgaaggcgaagatcgagggcagggaaatcagcaaacagccgccgcgcaag
caagataacatcatcgacttgaaggaggctttgcgccgcagcgccggtgactgcgacagc
ggaaaatctaccgctggtgcggggcgcaaatcctcccggaaagcgagctga
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