Agrobacterium tumefaciens Ach5: Ach5_43440
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Entry
Ach5_43440 CDS
T03816
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Ach5_43440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_43440
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Ach5_43440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AKC10117
LinkDB
All DBs
Position
linear:complement(1832205..1832996)
Genome browser
AA seq
263 aa
AA seq
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MARQVFWKGYLKLSLVTAAVSLTPATTESNKYRFHVLNRKTGNRVESRYVDSVTHKPVAA
KNQVKGFPRAEDDYVLLEDDEIDAVALESTRTIDIQTFVPTGSIDWIWYDRPHFLRPEDK
IGTEAFSVIREAMRANGVVGIARLVLYRRERAVLLEPSGKGIILWTLHYGEEVRESIDAL
DPKMKIEKPLLDAMEKRIGKQMTGWKPALVQDPIQKKISALLKTKSKTVSSPEKKTGTKT
RTGGNVINIMDALKKSLASDKKG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcaggttttctggaagggctatctgaagctgtcgctggtgacggccgcagtt
tcgctgacgcctgccacaaccgaaagcaacaaataccgctttcacgttctcaaccgcaaa
accggcaatcgcgtcgaaagccgctatgtcgacagcgttacccacaagccggtggccgca
aagaaccaggtgaaggggtttccccgcgccgaagacgattatgtgttgctggaggatgac
gagatcgatgcggtcgcgcttgaaagcacccgcaccatcgacatccagaccttcgtaccc
acaggttctatcgactggatatggtacgaccggccgcacttcctgcgcccggaagacaag
atcggcacggaagccttcagcgtgatccgggaagccatgcgggcaaacggcgtcgtcggt
attgcccggcttgttctctatcgccgcgaaagagcggttctgctagaaccgtcgggcaag
ggcatcattctgtggaccctgcactatggcgaggaagtgcgcgaaagcatcgacgcgcta
gacccgaagatgaaaatcgaaaagccgctgctggacgcgatggaaaaacgcatcggcaaa
cagatgacgggatggaaaccggcgctggtgcaggatccgatccagaaaaagatcagcgct
ttgctgaaaaccaagagcaagaccgtctcttccccggaaaagaagaccggcacgaaaacc
cggaccggcggcaatgtcatcaacatcatggatgccttgaagaaaagccttgcctcggac
aagaagggctga
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