Agrobacterium tumefaciens Ach5: Ach5_44650
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Entry
Ach5_44650 CDS
T03816
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_44650
Enzymes [BR:
atf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Ach5_44650
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Ach5_44650
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
AHL_synthase
Motif
Other DBs
NCBI-ProteinID:
AKC10238
UniProt:
A0AA86G272
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All DBs
Position
linear:1965627..1967150
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AA seq
507 aa
AA seq
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MSQLVLILGDQLSPSLSSLDGVDKTRDTILLCEVMAEATYVGHHKKKIAFIFSAMRHFAE
ELRGEGYRVRYTRIDDPDNAGSFSGEVQRALNDLTPSRICVTEAGEWRVKSEIERFASAF
NIEVDIRPDRRFLASHEEFERWAAGRKSLTMEYFYREMRRKTGLLMNGEEPVGGRWNFDS
ENRSPAKPDLLRPRHPVFAPDRITRDVIDTVERLFPDNFGKLENFGFAVTRADAERALSA
FINDFLMNFGATQDAMLQDDPYLNHSLLSFYINCGLLDALEVCRVAERAYYEGAAPLNAV
EGFIRQIIGWREYMRGIYWFAGPDYVDSNFFQNDRPLPGFYWTGKTHMNCMATVITETIE
NAYAHHIQRLMITGNFALLAGIDPKAVHQWYLEVYADAYEWVELPNVIGMSQFADGGFLG
TKPYAASGNYINRMSDYCSNCRYDPKERLGDKACPFNALYWDFLARNRERLKSNHRLAQP
YATWSRMSEDVRHDIRAKAALFLNRLS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcaactggtcttgatcctcggcgatcaattatctccctccctatcttcgctggat
ggtgtcgacaagacgcgcgacacgatcctgctttgcgaggtaatggcggaggctacctat
gtcggccatcacaaaaagaagatcgccttcatcttttccgccatgcgccacttcgccgag
gaactgcgtggcgaaggataccgggttcgctacacgcggattgatgatcccgacaatgcg
ggctccttctcgggtgaggtgcagcgggcgttaaacgacctgaccccttccaggatttgc
gtcaccgaggctggagaatggcgcgtcaagtcagagatcgagcgcttcgccagtgctttc
aatatcgaggtcgatatccgccctgatcggcgctttcttgccagccatgaggagttcgag
cgctgggcggccgggcgcaaaagcctgacgatggaatatttctatcgggaaatgcgtcgc
aagactggcctgttgatgaatggcgaagagccggtcggtggacgctggaattttgactcg
gaaaaccgcagtcccgccaagccggacctgctgaggccaagacacccggtcttcgcaccg
gacaggataacaagggatgtcatcgacaccgtcgagcggctgtttcccgacaatttcggc
aagcttgagaactttgggttcgccgtcacccgcgccgatgccgagcgggcgctcagtgcc
ttcataaacgatttcctgatgaatttcggcgccacgcaagatgccatgctgcaggatgac
ccgtatctcaaccactcgcttctgtctttttacatcaattgcgggctgctggatgcgctg
gaggtctgcagggtggcggagcgcgcctactacgagggcgcggcaccgctcaatgccgtc
gagggtttcattcgccagatcatcggctggcgggaatatatgcgcggcatctactggttt
gccgggcctgactatgtcgacagcaatttcttccaaaacgacaggccgctgccgggcttt
tactggacgggcaaaacccacatgaactgcatggcgaccgtaattacggaaaccatcgaa
aatgcctatgctcaccatatccagcgactgatgatcacgggaaactttgcccttcttgcc
ggcattgatccgaaggccgttcatcaatggtatctcgaggtctatgcggatgcctatgaa
tgggttgagctgccgaatgtgatcggcatgagccagttcgccgatggcggctttctcgga
acaaagccctatgccgcaagtggcaactacatcaatcgcatgtcggactattgcagtaat
tgccgctatgaccccaaggagcgtctcggtgacaaggcctgcccattcaacgcgctatac
tgggattttctggcccgcaaccgtgaaaggctgaaatccaaccatcggctggcgcagccc
tacgccacatggtcccggatgagcgaagacgtccgccatgatatcagagcaaaggcggct
ctgtttttgaaccgtctgagctga
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